Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1813 ATGAGGGGAAAACCGTTTTCGTCTTCCTCGGAGCTCCACGAAGCAAAATCCAAGATCAAAACTAATGGAGCTCCAGGTTCTTCGGTTCGAGTTTGTGATTTCTGTGGGAAACAGTTCAGTTCTGGAAAAGCCCTAGGAGGTCACAGAAGATATCACATTCAAGCTCAGAGAAAAATGGAGGCTCAGCAACGACAAGAAAAGGTCAATAATCGTCTTCTTCACCATCGTCATCAATATCCTTCAAATAATTATACCCTAAGAATCAATCCCAATAATAATAATATCTCCGAGGATTTCGTCGTCGGCGGCGTCGATGATGATAATCTCATTAAATCGAATACTGGGAATCTCAATTATTCTTCGAGATCTCCTTCTTTCCGTTGTGTTGTCTGCGACAAGGATTTCCCATCGAAGAAGTCACTTTTCGGCCATATGAGATCTCATCCTGAGAGAGAATGGAGAGGTATGAACCCTCCTTTATTCACTGATAACGCTTTAACTTCTTCTTCTTCAGCTGAACAGTTCAAAGTAGTGGAAGATGATCAATATCAAGATAACAACAACAATAATAATGGATCTTCGTCTTCGACTTTAGAAGAATCCTCAGTAGTGGTTGATCTTTCTTCGTCTTGTTCTGGAAGTAGCTGGCTTAAGAAAGATAGAAGAGGAAGAAGAAGCATTGGAGCTGCAGAAGCAGCTCAAACCCTTATGTATATGTATCTCTATGGTGATAACTACATTCATCTTCTTCCTCCTCGCGATCTGCAGCCTCCTCCTGCTGCAGAAGCAGAAGTATTATCAGTGAAGCAAAGGAAGAAGCATGTTGGTTCTTCCTCACCTGGGAAAAAACAAAGGTTGGATGATGATTGCAAGGAGAAATTAGAGGAAGCTCAGAATGAGAATAATACCTGGGACATGAAAGTGATGAGCTTGATGAAAGAGAAGAAGCTTAAGAGGAAGTACAATAAGAAGAAGATCAAGTCAGAAGCAGAAGGAGAATTGCTGATAAGAACTCTGAAGGAACAAGTGAAGTCATCATCATCATCACAAAGCTATGCATGCAGCATCTGTAATAAATCTTTCTCAAGTTTTCAAGCTTTAGGGGGACACAGATCCAAGCACAACAGAGAGAAGAACATAGTTATAAGCACCAAGGGCAAGGAAGTGGTGGAATTACTAAGAGTAGAAGAAGAGCAAGAAGAAGAAGAAAACAAGGTTTGCATCAATGGAGCTTTGTCAAATGCTGCAGGATTGAGCTGTGAAGAAGAGCTGGAAGAAGGAGGAGGAGGAAGAGCGTCTCTAATTAGTAGTGAAGAGAGATTGGTACTAAGTTCGAATGATCATGATGAGAATAACAGCAATGAAGAGGCAAGTCATGAATCTGGAGGTTCGAAAATACTGGATTTTGATCTGAATGTGCCGTATGTTTCTGAGCAGGAAGCAACTGAGCTATAA 1455 0.4096 MRGKPFSSSSELHEAKSKIKTNGAPGSSVRVCDFCGKQFSSGKALGGHRRYHIQAQRKMEAQQRQEKVNNRLLHHRHQYPSNNYTLRINPNNNNISEDFVVGGVDDDNLIKSNTGNLNYSSRSPSFRCVVCDKDFPSKKSLFGHMRSHPEREWRGMNPPLFTDNALTSSSSAEQFKVVEDDQYQDNNNNNNGSSSSTLEESSVVVDLSSSCSGSSWLKKDRRGRRSIGAAEAAQTLMYMYLYGDNYIHLLPPRDLQPPPAAEAEVLSVKQRKKHVGSSSPGKKQRLDDDCKEKLEEAQNENNTWDMKVMSLMKEKKLKRKYNKKKIKSEAEGELLIRTLKEQVKSSSSSQSYACSICNKSFSSFQALGGHRSKHNREKNIVISTKGKEVVELLRVEEEQEEEENKVCINGALSNAAGLSCEEELEEGGGGRASLISSEERLVLSSNDHDENNSNEEASHESGGSKILDFDLNVPYVSEQEATEL 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1813 484 MobiDBLite consensus disorder prediction 442 456 - -
Lele26g1813 484 Gene3D Classic Zinc Finger 325 408 - -
Lele26g1813 484 ProSiteProfiles Zinc finger C2H2 type domain profile. 30 57 IPR013087 -
Lele26g1813 484 Pfam C2H2-type zinc finger 352 376 - -
Lele26g1813 484 Pfam C2H2-type zinc finger 126 150 - -
Lele26g1813 484 Pfam C2H2-type zinc finger 30 52 - -
Lele26g1813 484 ProSitePatterns Zinc finger C2H2 type domain signature. 32 52 IPR013087 -
Lele26g1813 484 MobiDBLite consensus disorder prediction 427 472 - -
Lele26g1813 484 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 20 64 IPR044653 GO:0003700
Lele26g1813 484 SUPERFAMILY beta-beta-alpha zinc fingers 31 148 IPR036236 -
Lele26g1813 484 MobiDBLite consensus disorder prediction 266 289 - -
Lele26g1813 484 Coils Coil 283 314 - -
Lele26g1813 484 ProSitePatterns Zinc finger C2H2 type domain signature. 128 148 IPR013087 -
Lele26g1813 484 ProSitePatterns Zinc finger C2H2 type domain signature. 354 374 IPR013087 -
Lele26g1813 484 Gene3D Classic Zinc Finger 4 153 - -
Lele26g1813 484 ProSiteProfiles Zinc finger C2H2 type domain profile. 352 379 IPR013087 -
Lele26g1813 484 SUPERFAMILY beta-beta-alpha zinc fingers 349 380 IPR036236 -
Lele26g1813 484 ProSiteProfiles Zinc finger C2H2 type domain profile. 126 153 IPR013087 -
Lele26g1813 484 SMART c2h2final6 126 148 IPR013087 -
Lele26g1813 484 SMART c2h2final6 352 374 IPR013087 -
Lele26g1813 484 SMART c2h2final6 30 52 IPR013087 -
Lele26g1813 484 MobiDBLite consensus disorder prediction 1 26 - -
Lele26g1813 484 MobiDBLite consensus disorder prediction 180 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1813 Lele-ChrLele26 21708101 21709555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1813 31 159 C2H2 Transcription Factor Family AT2G26940 30.233 3.31e-11 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele26g1813 zf-C2H2_6 3.8e-10 CL0361