Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1812 ATGAGTAACATGACGAGTGGTGATGCTCCAAAAATGCCCAGAGGTCGGCGGTCCATGTTTGCAGTTGAAGAAGCAAGTTACAAAGGTAATGTGGGAGAAGAAGGACCTCTGAAGAAAGGCCCTTGGACGGCAGCAGAGGATGTGATTTTAATGGATTATGTGAAAAAACATGGAGAAGGAAATTGGAATGCAGTCCAAAAGCACTCAGGCCTTGCCCGCTGTGGGAAAAGCTGCCGTCTACGATGGGCAAATCATTTGAGGCCAGAATTAAAAAAGGGTGCATTTACTGAAGAGGAGGAGCGTCGAATCATTGAGCTTCATGCTAGGATGGGAAACAAATGGGCTCGAATGGCAACAGAGTTGCCTGGACGTACAGATAATGAGATAAAGAATTACTGGAACACTAGAATTAAGAGAATGCAACGAGCTGGATTACCAATTTATCCTCCTGACATATGCCAGGGGGTACGTAGTCAAGAAAATTTGGATGTGGGTACTTTGATGAGTGGAGCTAGCCAGCACTCTGATATCTCACAAGATGGCAACTTCAATGTCCCACAACTGGATTTCAAAAATTATGATCTCAGTCGGGCTTATCTACCAAATGGTCCATCTGTTTTAGATATTCCTGAAAGCAGTCTGTTTCAGCAAACTTTAGGCCCACCGCATAGTGATGATTTATTGTTCGGAAACCCTCTGAAACACCTTAGGGAGTCAGATATGCTTTATAATAGATTGGACAATTGTAGCGGCTGTATGATACCAGCCTATGATAAGTTTGCAGATTATACTGCTGAGCCCCCTCATCTTTTGCCATCTCCAAGCAATCTGTCCTTTGACCCCGACGATTTGTTTTGTGGTGATAATCTTCATGGCAGCCATGCCACTTTAAATGGCACTATCTCTTCTTCATCGCCCATACCCGAGGCAATGAAGTTGGAGCTCCCTTCACTCCAATATTTAGAAACACAACAAGGTAGCTGGGATGCAAATGTATCCTCACTGCCTTCACTGGAATCTACTGATACATTGTTTCAGTCTTCTCCAGTTGAACAGTATCAGTCATGTAATGTTACTCCAGATAGTAGTGGTTTGTTAGAATCAATAATATGTGAAACCAAGCTTCCCAAGGCCTCAAATAATGATTCATTGTGGAAGATTCCTGATGAGTACATACTGAATGTGGCTAAAACAGAGACAGAATGGGACCAACATGGGGACACAAATTCATCCTTAGGTCACTCTTCTGCCTCAGTTCTTACAGATTATACTCCTGTTAGCATCTGCTCAGTTGATGACCCCTACTTCACTGAACAAACAAAAGGTCATGAATTGAGGCAGGAAGCAATTTCACAGGATCCACCTCACGTTTCCAAAAGCAAAGGAACTTCTAGTCAGATAGACATAACAAGGCCAGATGCTTTGCTTGGCATGTGTTGGTTGGAGAATGATACCCGTTACCGCTAG 1467 0.4335 MSNMTSGDAPKMPRGRRSMFAVEEASYKGNVGEEGPLKKGPWTAAEDVILMDYVKKHGEGNWNAVQKHSGLARCGKSCRLRWANHLRPELKKGAFTEEEERRIIELHARMGNKWARMATELPGRTDNEIKNYWNTRIKRMQRAGLPIYPPDICQGVRSQENLDVGTLMSGASQHSDISQDGNFNVPQLDFKNYDLSRAYLPNGPSVLDIPESSLFQQTLGPPHSDDLLFGNPLKHLRESDMLYNRLDNCSGCMIPAYDKFADYTAEPPHLLPSPSNLSFDPDDLFCGDNLHGSHATLNGTISSSSPIPEAMKLELPSLQYLETQQGSWDANVSSLPSLESTDTLFQSSPVEQYQSCNVTPDSSGLLESIICETKLPKASNNDSLWKIPDEYILNVAKTETEWDQHGDTNSSLGHSSASVLTDYTPVSICSVDDPYFTEQTKGHELRQEAISQDPPHVSKSKGTSSQIDITRPDALLGMCWLENDTRYR 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1812 488 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 37 86 IPR017930 -
Lele26g1812 488 Pfam Myb-like DNA-binding domain 92 135 IPR001005 -
Lele26g1812 488 Pfam Myb-like DNA-binding domain 39 86 IPR001005 -
Lele26g1812 488 Gene3D - 94 161 - -
Lele26g1812 488 MobiDBLite consensus disorder prediction 440 466 - -
Lele26g1812 488 ProSiteProfiles Myb-like domain profile. 34 86 IPR001005 -
Lele26g1812 488 CDD SANT 41 86 IPR001005 -
Lele26g1812 488 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 28 485 - -
Lele26g1812 488 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 87 141 IPR017930 -
Lele26g1812 488 FunFam MYB-related transcription factor 38 91 - -
Lele26g1812 488 Gene3D - 38 91 - -
Lele26g1812 488 SUPERFAMILY Homeodomain-like 37 133 IPR009057 -
Lele26g1812 488 FunFam Transcription factor GAMYB 94 140 - -
Lele26g1812 488 ProSiteProfiles Myb-like domain profile. 87 137 IPR001005 -
Lele26g1812 488 SMART sant 38 88 IPR001005 -
Lele26g1812 488 SMART sant 91 139 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1812 Lele-ChrLele26 21687278 21691010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1812 37 483 MYB Transcription Factor Family AT5G06100 36.786 3.14e-79 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele26g1812 Myb_DNA-binding 4.5e-14 CL0123