Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1809 ATGATTTTTCACATGAAAAAGTCAATGGATGACTCAGAAGTTAAACCCAAGAAGGACCCTGTAAACTATTTCGTTGGTGTGTCATTTCCAGGGAAGCCGAAGTCTCAAATTGAGACAAGTAAGAATTCAAATTCTTCAGAACGAAAAGCTGCATCACAAACTTCAGAACCAACCATTAGCAGATCCATATCTTCTAATCTTAAATCCTTCAGCTTCAATGATCTAAAAGAAGCCACAAAGAATTTCAGACAAGAAAACTTAATTGGAGAAGGAGGATTTGGGCTTGTTTACAAGGGATGGATTAATGAGAACTCCTTCGCTCCCTCGAGACCGGGTAGAGGGATCATGGTTGCCATCAAGAAACTTAAGCCAGAAAGCTTTCAAGGCCATAAGGAATGGCTTGCAGAAGTCAATTATCTAGGTCAACTCCACCATGAAAATATAGTGAAACTTATTGGTTATTGCTCAGATTCTAAAAACAGGCTTCTAGTTTATGAGTGTATGGAGAAAGGAAGTTTGGAGACTCATTTATTCAGAAAAGGTGTTCAGCCTTTGTCGTGGGCTGTGCGGATCAATATTGCTGTTGGAGTTGCTAGAGGGTTAGCATTTTTGCATAACTTGGATGCAAATGTTATCTACCGTGACTTAAAGGCTTCTAATGTATTACTTGATTCGGACTTCAACTCAAAGCTTGCAGATTTTGGCTTGGCAAGAGATGGTCCTACTGGCGATAACACTCATGTTTCAACCAGAGTTATTGGAACTCAAGGTTATGCCGCGCCAGAGTATGTAGCTACAGGGAGAAGGGTGATAGAGGTTGACAAACTCGGAATTGCTCTGGAAACTCTGGTCGATTGGGCGATGCCATTTCTTAAAGATGGCAAGCGAGTTTCAAGAATCATGGATATGAGGTTAGGTGGTCAATACTCGAAAACTGGAGCTCAAGCTGCAGCTGCATTAGCATATCAATGCCTAGATGCGGATCCAAAATACAGACCAACTATGACACAGGTTCTAGCCACATTGGAAGAATTCCATTCCTCAAACACAATAATCCCCAGGACCCCTCCAAAGTCTGAATCTAGGAACGATGCCATCAACCATGCTCGTCATTCCCTAAGGTCAACCAGAAATACGCGCTGA 1143 0.4191 MIFHMKKSMDDSEVKPKKDPVNYFVGVSFPGKPKSQIETSKNSNSSERKAASQTSEPTISRSISSNLKSFSFNDLKEATKNFRQENLIGEGGFGLVYKGWINENSFAPSRPGRGIMVAIKKLKPESFQGHKEWLAEVNYLGQLHHENIVKLIGYCSDSKNRLLVYECMEKGSLETHLFRKGVQPLSWAVRINIAVGVARGLAFLHNLDANVIYRDLKASNVLLDSDFNSKLADFGLARDGPTGDNTHVSTRVIGTQGYAAPEYVATGRRVIEVDKLGIALETLVDWAMPFLKDGKRVSRIMDMRLGGQYSKTGAQAAAALAYQCLDADPKYRPTMTQVLATLEEFHSSNTIIPRTPPKSESRNDAINHARHSLRSTRNTR 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1809 380 ProSiteProfiles Protein kinase domain profile. 82 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1809 380 Pfam Protein kinase domain 83 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1809 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Lele26g1809 380 Gene3D Transferase(Phosphotransferase) domain 1 168 361 - -
Lele26g1809 380 SUPERFAMILY Protein kinase-like (PK-like) 58 349 IPR011009 -
Lele26g1809 380 MobiDBLite consensus disorder prediction 1 20 - -
Lele26g1809 380 FunFam Os07g0541700 protein 168 255 - -
Lele26g1809 380 MobiDBLite consensus disorder prediction 33 60 - -
Lele26g1809 380 MobiDBLite consensus disorder prediction 1 18 - -
Lele26g1809 380 ProSitePatterns Protein kinases ATP-binding region signature. 88 121 IPR017441 GO:0005524
Lele26g1809 380 MobiDBLite consensus disorder prediction 28 60 - -
Lele26g1809 380 MobiDBLite consensus disorder prediction 349 380 - -
Lele26g1809 380 Gene3D Phosphorylase Kinase; domain 1 51 167 - -
Lele26g1809 380 FunFam Serine/threonine-protein kinase BIK1 47 167 - -
Lele26g1809 380 PANTHER OS01G0588500 PROTEIN-RELATED 45 346 - -
Lele26g1809 380 SMART serkin_6 82 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1809 Lele-ChrLele26 21655380 21659228 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1809 28 342 Glycoside Hydrolase AT3G07070 42.012 2.56e-81 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele26g1809 Pkinase 1.5e-41 CL0016