Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1807 ATGGGAAATTCCTGTAGGAAACCCATTGTTCATGTGTCTTCCTCCAACATTTCTGGAAAGGAGAAGTCACAAAGTGAGACAAGTAAGAATTCAAATTCTTCAGAAAGAAAAGCTGTATCACAAACTTTAGAACCAACTGTCAGCAGATCCATATCTTCTACTCTTAAATCCTTCACTTTCAGTGATCTAAAAGAAGCTACAAGGAATTTCAGACAAGAAAACCTAATTGGGGAGGGAGGGTTTGGGTTTGTTTACAAGGGATGGATCAATGAGAACTCCTTTGCTCCCACAAAACCAGGGAGCGGGATCATGGTGGCCATCAAGAACCTTAAGCCAGAAAGCTTCCAAGGCCATAAGGAATGGCTTGCAGAAGTCAATTATCTAGGTCAACTTCACCATGAAAATGTAGTAAAACTTATTGGTTATTGCTCAGACGCTAAAAACAGGCTTCTAGTTTATGAGTTTATGCAGAGAGGAAGTTTAGAGAATCATTTATTTAGAAAAGGTGTTCAGCCAATATCCTGGGCTGCACGGATCAATATTGCAGTTGGCGTTGCTAGAGGATTAGCATTTTTGCATACCTTGGATGCAAATGTTATCTACCGTGACTTAAAGGCTTCTAATGTATTACTTGATTCAGACTTCAACTCAAAGCTTGCAGATTTTGGCTTGGCAAGAGATGGTCCTACTGGAGATAACACTCATGTTTCAACCAGAGTTATTGGAACTCGAGGTTATGCCGCACCTGAGTATGTAGCTACAGGTCACTTGACTCTGAGGAGCGACGTTTACAGCTTTGGTGTTGTCTTGTTAGAGTTACTGACAGGGAGAAGGGTGGTAGAGGTTGACAAACTCGGAATTGCTCGGGAAACTCTGGTCGATTGGGCGATGCCATTTCTCAAAGATGGCAAGCGGATTTCAAGAATCATGGATTTGAGGTTAGGTGGTCAGTACTCCAGAAAAGAAGCTCAAGCTGCAGCTGCACTTGCATATCAATGCCTAAAAGCAGGTCCAAAATATAGGCCAACTATGATACATGTTCTTGCCACGTTGGAAGAACTCCATTCCTCAAACACAACAATCCCAAAGACTCCGCCAAAGTCCGAGTCTGGGAACAATACCATCAAGCATGCTCGTCATTCCGTAAAGTCAATGAGAAATACACGCTGA 1170 0.4239 MGNSCRKPIVHVSSSNISGKEKSQSETSKNSNSSERKAVSQTLEPTVSRSISSTLKSFTFSDLKEATRNFRQENLIGEGGFGFVYKGWINENSFAPTKPGSGIMVAIKNLKPESFQGHKEWLAEVNYLGQLHHENVVKLIGYCSDAKNRLLVYEFMQRGSLENHLFRKGVQPISWAARINIAVGVARGLAFLHTLDANVIYRDLKASNVLLDSDFNSKLADFGLARDGPTGDNTHVSTRVIGTRGYAAPEYVATGHLTLRSDVYSFGVVLLELLTGRRVVEVDKLGIARETLVDWAMPFLKDGKRISRIMDLRLGGQYSRKEAQAAAALAYQCLKAGPKYRPTMIHVLATLEELHSSNTTIPKTPPKSESGNNTIKHARHSVKSMRNTR 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1807 389 MobiDBLite consensus disorder prediction 1 45 - -
Lele26g1807 389 ProSitePatterns Protein kinases ATP-binding region signature. 76 108 IPR017441 GO:0005524
Lele26g1807 389 MobiDBLite consensus disorder prediction 357 378 - -
Lele26g1807 389 PANTHER OS01G0588500 PROTEIN-RELATED 25 355 - -
Lele26g1807 389 MobiDBLite consensus disorder prediction 8 45 - -
Lele26g1807 389 Gene3D Transferase(Phosphotransferase) domain 1 156 374 - -
Lele26g1807 389 SMART serkin_6 70 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1807 389 SUPERFAMILY Protein kinase-like (PK-like) 52 370 IPR011009 -
Lele26g1807 389 MobiDBLite consensus disorder prediction 357 389 - -
Lele26g1807 389 Gene3D Phosphorylase Kinase; domain 1 45 155 - -
Lele26g1807 389 CDD STKc_IRAK 76 354 - -
Lele26g1807 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Lele26g1807 389 ProSiteProfiles Protein kinase domain profile. 70 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1807 389 FunFam Serine/threonine-protein kinase BIK1 34 155 - -
Lele26g1807 389 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 156 359 - -
Lele26g1807 389 Pfam Protein tyrosine and serine/threonine kinase 73 349 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1807 Lele-ChrLele26 21645163 21648958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1807 14 351 Glycoside Hydrolase AT3G07070 46.334 3.56e-99 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele26g1807 PK_Tyr_Ser-Thr 6.4e-47 CL0016