Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1805 ATGAGCCAGTCTAAAATCAAGCGTCGTATAGGTAAATATGAGGTGGGAAGAACCATTGGTGAGGGAACATTTGCAAAAGTTAAATTTGCAAGGAACACTGAGACTGGGGAGCCTGTGGCTATCAAAATTCTGGAGAAAGAGAAGGTTCTCAAGCACAAGATGGCTGAGCAGATCAGGCGGGAAATAGCAACAATGAAATTAGTCAGGCATCCAAATGTTGTTCGATTATATGAGGTGATGGGGAGCAGGACAAAAATATATATAGTTTTGGAGTTTGTGACTGGAGGAGAGCTCTTTGACAAAATTGATGATGGACTGCTTCATACTACATGTGGAACTCCAAATTACGTTGCTCCTGAGGTCCTTGATGATGGAGGCTATGATGGAGCAACTGCAGACTTGTGGTCTTGTGGAGTAATTCTCTTTGTATTACTTGCAGGTTACTTGCCTTTTGATGACCCTAATCTTATGAACCTGTATAAAAAAATCTCTGCTGCTGAATTTACTTGTCCCCCATGGATTTCATTCAGTGCCAGGAAATTGATAACTCGAATTTTGGATCCTAACCCCGTGACTCGTATCACTACATCTGAAATCTTGGCCGATGAATGGTTTAAGAAAGATTATAGGCCTCCAGTTTTTGAGGAGACGGGGGAGACCAACCTTGATGACATTGAAGCTGTCTTTAGAGATTCTGAGGAACACCTTGTGACGGAGAAGAAGGAAGAGCAGCCAACAGCCATCAATGCATTTGAATTAATTTCCATGTCCAAAGGGCTAAACCTCGAAAACTTGTTTGATATAGAGCAGGCATTGAAAAGAGAAACGAGGTTCACATCAAGATGCCCTGCAAAAGAGATAGTTAACAAGATCGAAGAAGCTGTAAAGCCTCTTGGTTTTGATGTGCAGAAGAAAAACTACAAGATGAGGCTTGAGAATGTGAAAGCAGGAAGGAAGGGAAACCTTAATATTGCCACTGAGATATTTCAAGTGGCACCTTCTCTTCACATGGTTGAGGTGAGGAAAGCAAAAGGTGATACATTGGAGTTTCACACGTTCTACAAAAATCTTTCAACAAGTCTTGATGATGTTGTTTGGAAAGCTGAGGTGGAGGATACTCAAGAAACGAAGTGA 1134 0.4153 MSQSKIKRRIGKYEVGRTIGEGTFAKVKFARNTETGEPVAIKILEKEKVLKHKMAEQIRREIATMKLVRHPNVVRLYEVMGSRTKIYIVLEFVTGGELFDKIDDGLLHTTCGTPNYVAPEVLDDGGYDGATADLWSCGVILFVLLAGYLPFDDPNLMNLYKKISAAEFTCPPWISFSARKLITRILDPNPVTRITTSEILADEWFKKDYRPPVFEETGETNLDDIEAVFRDSEEHLVTEKKEEQPTAINAFELISMSKGLNLENLFDIEQALKRETRFTSRCPAKEIVNKIEEAVKPLGFDVQKKNYKMRLENVKAGRKGNLNIATEIFQVAPSLHMVEVRKAKGDTLEFHTFYKNLSTSLDDVVWKAEVEDTQETK 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1805 377 Gene3D Phosphorylase Kinase; domain 1 3 87 - -
Lele26g1805 377 Pfam Protein kinase domain 13 103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1805 377 Pfam Protein kinase domain 107 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1805 377 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Lele26g1805 377 ProSiteProfiles Protein kinase domain profile. 13 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1805 377 Pfam NAF domain 245 304 IPR004041 GO:0007165
Lele26g1805 377 Gene3D Kinase associated domain 1, KA1 242 367 - -
Lele26g1805 377 FunFam Non-specific serine/threonine protein kinase 4 92 - -
Lele26g1805 377 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 104 352 - -
Lele26g1805 377 Gene3D Transferase(Phosphotransferase) domain 1 88 232 - -
Lele26g1805 377 CDD CIPK_C 249 358 - -
Lele26g1805 377 SUPERFAMILY Protein kinase-like (PK-like) 9 219 IPR011009 -
Lele26g1805 377 ProSiteProfiles NAF domain profile. 243 267 IPR018451 GO:0007165
Lele26g1805 377 FunFam Non-specific serine/threonine protein kinase 242 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1805 Lele-ChrLele26 21621592 21626391 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1805 3 348 CBL-interacting serine-threonine protein kinases AT2G26980 62.592 1.54e-180 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele26g1805 Pkinase 7.4e-18 CL0016