Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1795 ATGCTCATAAACCAGCTAGGGTTTTTATCATCGAGCGCGGAGGCAAAAGGAGGAGGACTCAGTCACCGGAGGCAGAAATTCCTGAAAATGGTGAAGTTCTTGAAGCAGAACAAGGCCGTTATTCTTCTTCAGGGACGCTATGCTGGTCGCAAAGGAGTGATCGTACGTACCTTCGACGACGGCACGCGTGACCGTGCGTACGGCCACTGTTTGGTCGCCGGAATCAAGAAGTACCCAAGCAAGGTCATCAAGAAGGATTCCGCTAAGAAGACGGCCAAGAAATCTAGGGTTAAGGCTTTCGTCAAGCTCGTGAACTACCAGCATCTCATGCCTACTCGCTACACCCTCGATGTGGATCTTAAGGACGTAGTGACCATCGATGCCCTTCAATCTAAGGACAAGAAGGTTACCGCCTTGAAGGAGACCAAGAAGAGGTTCGAGGAGAGGTTCAAGACCGGCAAGAACAGTATGGATTCGTATCAAATCGGCATTCGTGTTCTGGGGGCAAATGTTCACATTTTCATGCTCATTAGTGTTAGTGCAGCTTGCATTGTAAATGTTGCTACATTTCTGTATGGTGGCACTATGTCAATGCGTCTATTGGCTTTGTTTGCGTCATTCTCATGGAACTTGCAGGATACTCTCAGTTCATTTGTGGGAGATGTGCAAGGGTGTATTGTGATTTGTTTGCCTTCTCTTGGCTTTTGA 708 0.4774 MLINQLGFLSSSAEAKGGGLSHRRQKFLKMVKFLKQNKAVILLQGRYAGRKGVIVRTFDDGTRDRAYGHCLVAGIKKYPSKVIKKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDVVTIDALQSKDKKVTALKETKKRFEERFKTGKNSMDSYQIGIRVLGANVHIFMLISVSAACIVNVATFLYGGTMSMRLLALFASFSWNLQDTLSSFVGDVQGCIVICLPSLGF 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1795 235 SUPERFAMILY Translation proteins SH3-like domain 32 140 IPR008991 -
Lele26g1795 235 Coils Coil 129 149 - -
Lele26g1795 235 CDD KOW_RPL27 35 117 IPR041991 -
Lele26g1795 235 Pfam Ribosomal L27e protein family 81 156 IPR001141 GO:0003735|GO:0005840|GO:0006412
Lele26g1795 235 FunFam 60S ribosomal protein L27 30 162 - -
Lele26g1795 235 Gene3D - 30 170 IPR038655 -
Lele26g1795 235 PANTHER 60S RIBOSOMAL PROTEIN L27 30 156 IPR001141 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1795 Lele-ChrLele26 21518595 21521108 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1795 30 155 Cytoplasmic Ribosomal Protein Gene Family AT3G22230 84.921 1.46e-75 223