Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1756 ATGGAGTTCGTGGGCAAAACTGTTAAGAAGGAGGTCAAGGGGGTTGGGATTGTCTCGGGAACAGTGAAATCTTTCGATTCGTCATCTGGGTTCGTTGAGATCGTTTACGAAGATGGTAATTCTGAGGAGCTTGAATCGTCTGACGTGGCTTCTCTTGTGCAAGGTGAACCGGAGTTAGTACAGGTGAAGCGCAGGGGAAGGAAACCTAAGAAGAGGCGTCGTGTGGAAAAGAAGCATGACACCAGTGGAAGTCCAGGTAATATCGATGAGAATTTGGGTGTTTCCATGCTAAATGATTCTGAATTTAGGGGGGTTTCGGATGAAGGTGTTTCTTCCAGTGGAAATTTCGAAGAAAATGGTGAATTAGATAGTGGGTCGAAGAGAAGCCCGGGGGTGGCAAATGGGGCGGGAGGGAATTCGACTTTGGGAACTGAAAACATGGGGAATTTGAATTGGAGTGCCAGCTCTAACGGGATCAAAGGAGTTCAACGGACGGAAAGCGGGTATGAAGAGAAATCCAAAGAAACTATATCTACTAACGGTAATTCCAGCATAACGGATTGTGTAAAAGATGGGGTTGATTTGAATGCTAGACTTAACCTGAATGAGGCCCTGGATCTGAATGATGGGTGTAGTTCACATGTTAATACTGAGGATGGTTTGAAGAAAAGGGGCTGTATAGATTTAAATGTGGATGTGAATCATGAAATTGATGCCAGTGCGAACGTCACTGATTTAGGTTGTCCAGCAGCTGATATGTCGAAGCGGGAATGTAATTTTGATTTGAATATGGAGGTATGTGATGAAGCTAAGGAAACTCAGGGTGATACTGCTGGAGACAAACTGTTAGATGGAGGTTGTTTGTTTGGTAAAATGGGGCAAAGCCCTAAGACAGAGACAGATATTAATCGAAATTCTGTACAAGATGATAGTGTTAAAAGGAATTTCGATGATAGCACTAATTCGATCAAATTGGAGGGAATTGATGGTTTCCATGAGTGTGCTGGTAAAGATGCCTCTGAGAGTTTGATTGAGGAAAAGGAAGATGGAGTTTACAATGGAGGTACTGTGGCAATTGACTCTCTTGGGGTTTCAAACGCTATTTCTGTTAAGGATTGTGATTCTGTAGAGGTTTGGCAGGAGCATAGTCCGTCTGAGGGTGGTATTGCTATAACTCATGGATGTCAAAATGAGCCAGGAAGCCAACATAAACAAGGAAGTGGCCGAAGGAAGAGAAGAAAATTATCAGATAATCTGAAAGCCACTCCAGAGACAGTTTTAAGGAGGAGTTCTCGCCGTGCATCAGCTCTAAAACGTGATTCAAGCCCTGTAACATTGAATGTGATGGATGATCCTTTGATGTCTCCAGGGCCCAGTGCCATAACAGAAGAAAAAGCAATTGTTTCTGGCTCTGAGCAGTATGAACAGTGCAGTGAACTTCCGCCAAAGCTGCTACTACCCCCTTCTTCTCAAAATTTGAACTTAGATAACATTCCTGTTCTTGATCTTTTTTCCATTTATGCTTGTTTTAGGTCCTTCAGTACTATATTATTTTTAAGTCCTTTTGAGTTGGAGGATTTTGTAACTGCACTGAAGAGTGTAAATCCTAACATATTATTTGACAACATTCATGTTTCTATTTTACAAACTCTTAGAAAGCACTTGGAATACCTTTCAAATGAGGGTTGCCAATCTGCATCCGATTGTCTGAGAAGTTTGAACTGGGATTTGTTGGACCTGGTCACATGGCCCATTTTTATGGCTGAGTATCTGCTGATTCATGGTTCTGGACTTAAAAATGGTTTTAATCTTAAGTACTTGATGTTTGGAGGTGACTACTACAAGCAGCCAGTAACTTTGAAGATTGAAATTCTTCAGTGCCTTTGTGATGATATGATGGAAGTGGAAGCCATAAGGTTGGAGCTTAACAGAAGATCTTTGGTGACTGAGGCTGATATGAGTTTTGATCAAAGTATGTATTTTGACATTTGCAAGAAAAGAAGAGCTCTAATGGACATGTCTTGCTGTTCTCCGTCTGAGGAAATTGTTGATGGCACAAATGACTGGAACAGTGATGAATGCTGTCTTTGCAAGATGGATGGAAGTTTAATATGTTGTGATGGTTGCCCTGCTGCATTCCACTCCAGGTGTGTAGGGGTTGCAAATGACCATTTACCTGAAGGTGACTGGTATTGCCCTGAGTGTGCAATTAGCAGACGTAAGCCTTGGATTAAACTGCAAAAATCACTTCGAGGGGCAGACCTTTTAGGAATTGATCCTCATGGTCGTCTTTATTTTGATAGCTGCGGTTACCTGTTAGTGTCAGATTCATCTGACATGAGATCCTTGTTCAATTACTACCACATAAATGATCTGAATGTTTTAATTGAAGTCCTAAAAGCGGCTGATGCTTTCTATGGTAGCATATTAATGGCAATCTGCAAGCATTGGGATATTACTTTTAACTTAAATGTTAGCAGAAACATGCATATGAAGACAGAATACTCTGCTATATATCCATCCTCAGCACCTTTTTCATCCTCAGAAGCATTCTTGGACAAGAATCAGGCTGCTGATCAAAGAAAGTATGAAGAAACTTCTACTGTACAACCTGTGGGCCAAGAGTTTCTCAAAGGTGAGAGACAGCTAGATTCAGTTATAACAACAGAAAGCCCCTGTGTTGCTTCAGAGGTATCAGCTGATACCACAAAAATGAGGTCAACCACTGATGATGAGACTCTAACACATGGACTCCATGATTCCAATAGATCTGATGGGGCCATGAATCAGCCAGGAATACCAGAGAAATTGCACCCAGTCACTCACTCTTCTTTGAGGTCTTCCCGCTTAGATACAAGCCGTAAGGTAAACTTAACATCTGCGGGTATTGGTTATACTGCATCGGCTATGTCCACTGGGAATAGAGCTACTTCAGAAATGCCTTGTGGAATTGACTACATAAACTATTACAGCTTTGCAAGAACAGCTTCATTAGTGGCAGAGGAGTTGGCACGCAAATCATCGGAAAAGATCAAGAGTATTGAAATGTCTGAAGAAGACTTAATTTCAGAACAAGCGAAGGCTATTATTAAGAAATCTACGAACTTCTACTGGCCAAGTTCTCAAAATATTAATGCAGCTGCCCAAAAGGAAAAATGTGGGTGGTGCTATACGTGCAGAGTGGAAAATGATGACAGAGATTGCTTGTTTAACTCTGTGGTGATGTATGCTCAGGAAGTGTCTACAAGTGAGTTAGTTGGGTTTCAACCAAAGAATCAGAATGCCCATCTTAGAGATGTCATATTTTGTATTCTCTCCCTTGAGGAACGATTACGTGGGCTTCTATTGGGGCCTTGGTTGAGCCTCCATCATTCTAAGAATTGGCGTAACAATCTTCTTAAGGCATCTGATGTTGCATCTATCAAATGCTCATTACTGACTTTAGAGTCCAACTTGCGGCCTCTTGCTCTTTCGGCAGACTGGTGGAAACATGTGGATTCTGTTGTTACCATGGGTTCGGCTTGTCATATTGTGGCCAGTTCACGCACATCTTGGAGGCATAGTATTGGAAGGAAAAGGGCAAGGTGCTCTGATGAGTCCAGTGCATCTTCAAACGCTAGTGGTTTGGGAGCATATTGGTGGAGAGGTGGGCGGCTTTCCCGTCATTTGTTTAATTGGAAGGTTCTGCCAAACTCTCTGCTTACCAAGGCTGCTAGACAAGCTGGGTGTACAAAGATACCTGGCATTCTATATCTCGAGAATTCTGATTTTTCAAAGAGAAGCAAATGTGTTGCTTGGAGAGCTGCTGTTGAGACATCAAGTAGTGTGGAGCAACTTGCTATCCAGGTTAGAGAGCTTGATTCAAACATTAGGTGGCATGACATTGAGAATACTCATCCTCTATTTGTGTTGGACAAGGAATCCAGAAAATCAATCAGGCTGTTCAAAAAAGTAATTGTACGCAGGAAGAGCACTGAAAGGGAATCTGTAAAATATCTTCTTGATTTTGGGAAGAGAAGGGCTGTTCCAAATATTGTCAAGAAACATGGTTCTTTGTTGGAAGAACCCTCAAGTGACAGGAAAAAATATTGGCTGGAAGAACCTTATGTTCCCTTGCATCTCATAAAGAATTTTGAGGACAAAAAAATTGCTCGCAAGTCCAATGAAGTGAAACCAGTAAAAGTTTTGGAGAATAGTGGATTTAATAAGGGATCTACCCAAAAACGGGGGTTTTCATATTTGTTTGATAGGATGGAAAGGCCTACCTATCATCAGTGTGGCCACTGCAACAAAGATGTTCCAACCAGGGAAGCTGTGAGCTGCCAGCACTGTAATGGATTCTTCCATAAGAGGCATGTCAGAAAATCTGGTGGCACCGCTGAATGCACATATTCATGTCAGAGATGCCTGGATGGGATTCATGCAAATTCTAATTCTAAAAGGAGAAAACTGGAACCAAAACGAGGGAATATTCAATCACAAAAGGGTCGAAAGGCTCCCTCTGTGGGTAGACCAGCTAAGCAAAACGGAAGTAAAAAACCATTGAGTAAGAGGCGGCAAGGAAAATCTCAAACCAATAAAAAGGTCCCACCAAATATACCTCTTCGTCGTTCAGCCAGGAAGGCCAAATGCTTGTACGTGCAAAAGAAAAGGAACGTAGGACGTAAAAAAGGAAAGAAAAGTAAATCCAAGAAGGTGACATCTACTAGGAAGCCCAAGGAAACTACTACTCGTTCTAAGACGGCGGTAACTTTCGAGCGTAAGAAAAGAACTCATGTCTGTAACAGTTACTGGCTTAATGGTCTTAGGTTGTCCACAAAGCCAAATGATGAACGAGTAATGCTGTTTAAGGAGAAAAAGCATCTTGCCCCCTCAGAAAGTTTTTATAGCACCTTTGATCAACCTAAATGTCATCTTTGTTGTGGAGATGGGTGCACTTTGAATTATATTGCTTGTGAAATCTGTGGAGAGTGGTTTCATGGGGATGCTTTTGGACTCACTCTAGAGAATGTCAGACAACTAATTGGATTTAGGTGTCATGTTTGCCGTGATAGGATTGCACCAATCTGTCCCCACAAGAATGGTAATGCCTTGACTCATGCTGAAATCAAAGCTGCAACTGATTGTGCAGAGCCATTGAGTCAGGTTTGA 5151 0.4188 MEFVGKTVKKEVKGVGIVSGTVKSFDSSSGFVEIVYEDGNSEELESSDVASLVQGEPELVQVKRRGRKPKKRRRVEKKHDTSGSPGNIDENLGVSMLNDSEFRGVSDEGVSSSGNFEENGELDSGSKRSPGVANGAGGNSTLGTENMGNLNWSASSNGIKGVQRTESGYEEKSKETISTNGNSSITDCVKDGVDLNARLNLNEALDLNDGCSSHVNTEDGLKKRGCIDLNVDVNHEIDASANVTDLGCPAADMSKRECNFDLNMEVCDEAKETQGDTAGDKLLDGGCLFGKMGQSPKTETDINRNSVQDDSVKRNFDDSTNSIKLEGIDGFHECAGKDASESLIEEKEDGVYNGGTVAIDSLGVSNAISVKDCDSVEVWQEHSPSEGGIAITHGCQNEPGSQHKQGSGRRKRRKLSDNLKATPETVLRRSSRRASALKRDSSPVTLNVMDDPLMSPGPSAITEEKAIVSGSEQYEQCSELPPKLLLPPSSQNLNLDNIPVLDLFSIYACFRSFSTILFLSPFELEDFVTALKSVNPNILFDNIHVSILQTLRKHLEYLSNEGCQSASDCLRSLNWDLLDLVTWPIFMAEYLLIHGSGLKNGFNLKYLMFGGDYYKQPVTLKIEILQCLCDDMMEVEAIRLELNRRSLVTEADMSFDQSMYFDICKKRRALMDMSCCSPSEEIVDGTNDWNSDECCLCKMDGSLICCDGCPAAFHSRCVGVANDHLPEGDWYCPECAISRRKPWIKLQKSLRGADLLGIDPHGRLYFDSCGYLLVSDSSDMRSLFNYYHINDLNVLIEVLKAADAFYGSILMAICKHWDITFNLNVSRNMHMKTEYSAIYPSSAPFSSSEAFLDKNQAADQRKYEETSTVQPVGQEFLKGERQLDSVITTESPCVASEVSADTTKMRSTTDDETLTHGLHDSNRSDGAMNQPGIPEKLHPVTHSSLRSSRLDTSRKVNLTSAGIGYTASAMSTGNRATSEMPCGIDYINYYSFARTASLVAEELARKSSEKIKSIEMSEEDLISEQAKAIIKKSTNFYWPSSQNINAAAQKEKCGWCYTCRVENDDRDCLFNSVVMYAQEVSTSELVGFQPKNQNAHLRDVIFCILSLEERLRGLLLGPWLSLHHSKNWRNNLLKASDVASIKCSLLTLESNLRPLALSADWWKHVDSVVTMGSACHIVASSRTSWRHSIGRKRARCSDESSASSNASGLGAYWWRGGRLSRHLFNWKVLPNSLLTKAARQAGCTKIPGILYLENSDFSKRSKCVAWRAAVETSSSVEQLAIQVRELDSNIRWHDIENTHPLFVLDKESRKSIRLFKKVIVRRKSTERESVKYLLDFGKRRAVPNIVKKHGSLLEEPSSDRKKYWLEEPYVPLHLIKNFEDKKIARKSNEVKPVKVLENSGFNKGSTQKRGFSYLFDRMERPTYHQCGHCNKDVPTREAVSCQHCNGFFHKRHVRKSGGTAECTYSCQRCLDGIHANSNSKRRKLEPKRGNIQSQKGRKAPSVGRPAKQNGSKKPLSKRRQGKSQTNKKVPPNIPLRRSARKAKCLYVQKKRNVGRKKGKKSKSKKVTSTRKPKETTTRSKTAVTFERKKRTHVCNSYWLNGLRLSTKPNDERVMLFKEKKHLAPSESFYSTFDQPKCHLCCGDGCTLNYIACEICGEWFHGDAFGLTLENVRQLIGFRCHVCRDRIAPICPHKNGNALTHAEIKAATDCAEPLSQV 1716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1756 1716 MobiDBLite consensus disorder prediction 1542 1567 - -
Lele26g1756 1716 SMART testlast3 497 557 IPR018501 -
Lele26g1756 1716 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1630 1688 IPR013083 -
Lele26g1756 1716 ProSitePatterns Zinc finger PHD-type signature. 694 735 IPR019786 -
Lele26g1756 1716 ProSiteProfiles DDT domain profile. 497 557 IPR018501 -
Lele26g1756 1716 MobiDBLite consensus disorder prediction 897 929 - -
Lele26g1756 1716 ProSiteProfiles Zinc finger PHD-type profile. 691 738 IPR019787 -
Lele26g1756 1716 PANTHER PHD FINGER FAMILY PROTEIN 2 1688 - -
Lele26g1756 1716 SUPERFAMILY FYVE/PHD zinc finger 688 746 IPR011011 -
Lele26g1756 1716 MobiDBLite consensus disorder prediction 43 183 - -
Lele26g1756 1716 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 611 642 IPR028942 -
Lele26g1756 1716 MobiDBLite consensus disorder prediction 133 163 - -
Lele26g1756 1716 MobiDBLite consensus disorder prediction 386 453 - -
Lele26g1756 1716 MobiDBLite consensus disorder prediction 105 120 - -
Lele26g1756 1716 Pfam DDT domain 500 553 IPR018501 -
Lele26g1756 1716 SUPERFAMILY FYVE/PHD zinc finger 1633 1688 IPR011011 -
Lele26g1756 1716 Pfam PHD-finger 694 736 IPR019787 -
Lele26g1756 1716 MobiDBLite consensus disorder prediction 1477 1492 - -
Lele26g1756 1716 SMART PHD_3 1425 1470 IPR001965 -
Lele26g1756 1716 SMART PHD_3 693 736 IPR001965 -
Lele26g1756 1716 SMART PHD_3 1636 1683 IPR001965 -
Lele26g1756 1716 MobiDBLite consensus disorder prediction 1477 1581 - -
Lele26g1756 1716 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 686 751 IPR013083 -
Lele26g1756 1716 MobiDBLite consensus disorder prediction 904 919 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1756 Lele-ChrLele26 21085264 21101124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1756 1 1692 PHD Transcription Factor Family AT5G12400 40.310 0.0 1104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Lele26g1756 DDT 1.3e-11 No_clan