Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1725 ATGCAGAGTTGTGAAGGCTTTGATGAGCTGATGAGCTTGTTTATTCCTTTTCCTTTATGTCTTTTTATTGGCTATATTGTGGCGAAACCATGTCCTCGCATGATCCAATCTACTAGTTATATCAGTGTAGCCATCGGTGGCGGTCCTGGATGTTTGTCGTTGCGGTGTCCTGATCCATCATGTGATGCTGCTGTTGGTGAAGATGTTATCAATTTATTGGCTTCTGATGAAGAGAAGGAGAAGTACGCTACTTATTTTATCAGGTCTTATGTTGAGGACAACAAAAAGTGCACTGAAGAAGCACATAGGCCTGTTGATTGTGATACTGTCGCCAAATGGATATTGAAGAATAGTGCTGAATCTGAAAATATGAATTGGATATTGGCCAATTCAAAACCTTGTCCAAGCTGCAAACGGCCAATTGAGAAAAACCAAGGTTGTATGCATATGACTTGCACACCACCCTGCAAGTATGAGTTTTGCTGGCTTTGCCTTGGTCCATGGTCTGAGCATGGTGAGACAACAGGTGGTTTTTATGCATGTAATCGTTATGAAGAAGCAAAAGCAGATAAAGAGTCCAGACAGAAAGCTCTTGCAGACTTAGAGCAAATGCAAACTGTGCACGTAAGGAATCTTCTTATTGTGGTTGTTTCTTCCACTGCCAATGGTACTGAGGTTGGGTGGCTTGAGAAGCTCAGTGACTTGCAGTGTCAGCCTGAATCACAGCTAAAATTCATCACAGAGGCCTGGTTACAGATCGTGGAATGCAGACGAGTTTTGAAATGGACATATGCCTATGGCTACTATATACCTGACAAGGAGAAGGCTAAGAGAGAGTTTTTTGAATACTTGCAAGGTGAAGCCGAGGCTGGATTGGAACGACTTCATCAGTGCGCTGAGAAGGAACTGGAGATATATCTCACTGAAAAGAATCCAGAAAGAGATTTTAACTGTTTCCGCACTAAACTTTCTGGACTAACCAGTGTGACACGGGCCTTCTTTGAGAATTTAGTAAAAGCTTTGGAGAATGGTTTATCAGATGTGACCTCTCACGTTCCAACCAACAGAAATGCAGGCTCAAAGAGCTTAGGGAGAAGCTATAGCGGGAAAAAGGGGAGGGAGGAGCCTGTAACACCCAGATCAAATGATTCTGGAATTGCTGGATGA 1167 0.4302 MQSCEGFDELMSLFIPFPLCLFIGYIVAKPCPRMIQSTSYISVAIGGGPGCLSLRCPDPSCDAAVGEDVINLLASDEEKEKYATYFIRSYVEDNKKCTEEAHRPVDCDTVAKWILKNSAESENMNWILANSKPCPSCKRPIEKNQGCMHMTCTPPCKYEFCWLCLGPWSEHGETTGGFYACNRYEEAKADKESRQKALADLEQMQTVHVRNLLIVVVSSTANGTEVGWLEKLSDLQCQPESQLKFITEAWLQIVECRRVLKWTYAYGYYIPDKEKAKREFFEYLQGEAEAGLERLHQCAEKELEIYLTEKNPERDFNCFRTKLSGLTSVTRAFFENLVKALENGLSDVTSHVPTNRNAGSKSLGRSYSGKKGREEPVTPRSNDSGIAG 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1725 388 ProSiteProfiles TRIAD supradomain profile. 1 185 IPR044066 -
Lele26g1725 388 SUPERFAMILY RING/U-box 126 174 - -
Lele26g1725 388 FunFam RBR-type E3 ubiquitin transferase 108 348 - -
Lele26g1725 388 MobiDBLite consensus disorder prediction 349 388 - -
Lele26g1725 388 Coils Coil 184 204 - -
Lele26g1725 388 Pfam IBR domain, a half RING-finger domain 124 172 IPR002867 -
Lele26g1725 388 MobiDBLite consensus disorder prediction 349 364 - -
Lele26g1725 388 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 39 263 IPR031127 GO:0004842|GO:0016567
Lele26g1725 388 Gene3D - 103 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1725 Lele-ChrLele26 20782268 20788283 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1725 40 369 ARIADNE family AT1G65430 61.266 4.23e-166 475