Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1720 ATGAAGTGGGAAATGGATATTCTCTCATCTTCTTCTGCTCATATGTCCAATCCCACTTGGCTCATTCAAGACGCCATGATGAATACAACAACAACTGCAACAAGATGGACTTCATCAGAGAACAAGCTGTTTGAGAATGCTCTCGCAGTGTATGATAAAGACACACCAGATCGGTGGGTGAAAGTTGCAGCAGTGATACCAGGGAAGACAGTGGGAGATGTGATTAAGCAGTACAGAGAATTAGAAGAAGATGTTATTAATATAGAAGCTGGATTGATCCCAATTCCAGGTTATAATAATAGCACCAAAACAACCTCACAACAATTCACCTTAGATTGGGTTAACTCTTCTGGATTTGATTCCTTCAAATCTCATGGTGGAAAAAGATCCTCATGTTCAGGAAGACCCCCCGAACAAGAAAGAAAGAAAGGTGTCCCATGGACTGAAGAAGAACACAAACTGTTTCTTCTGGGGTTGAAGAAGTATGGGAAAGGAGATTGGAGGAACATATCGCGAAATTTCGTGGTGACTCGGACGCCGACTCAGGTGGCTAGCCATGCTCAGAAGTACTTCATAAGGCAACTTTCAGGAGGGAAAGACAAGAGAAGGGCAAGCATTCATGATATAACTACAGCGAATCTGTCAGAAGCCACAAGAACCACTTCTTCTTCTTCCTCTTTAGAAGACAACAACAAAAATGGACTTAACTCAAAGCAGGAGGCAAATCCATCAAGTGCTAGTTTAGATCATCAAGCACATTTTCAATGGAACCAGCAGGCCAATGCAGGAGCTATGGGGTTTAATCCTTATGGGTTTCATAGCTCTTATGGGATGAAAGTGCAGGGCCAAAATAGTAATCTGCATAGAACTGCTCTTCTTAATAATCATGATTCTGCTTCTTCTTACTTTGGATCACCTCAAACTCATCAGAACATGGTTTTCCAAATGCATTCTTCTTCTGCTCACCACTTTTCTCATGCTTGA 984 0.4177 MKWEMDILSSSSAHMSNPTWLIQDAMMNTTTTATRWTSSENKLFENALAVYDKDTPDRWVKVAAVIPGKTVGDVIKQYRELEEDVINIEAGLIPIPGYNNSTKTTSQQFTLDWVNSSGFDSFKSHGGKRSSCSGRPPEQERKKGVPWTEEEHKLFLLGLKKYGKGDWRNISRNFVVTRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTANLSEATRTTSSSSSLEDNNKNGLNSKQEANPSSASLDHQAHFQWNQQANAGAMGFNPYGFHSSYGMKVQGQNSNLHRTALLNNHDSASSYFGSPQTHQNMVFQMHSSSAHHFSHA 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1720 327 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 30 288 IPR043363 -
Lele26g1720 327 CDD SANT 39 81 IPR001005 -
Lele26g1720 327 MobiDBLite consensus disorder prediction 216 249 - -
Lele26g1720 327 ProSiteProfiles Myb-like domain profile. 139 191 IPR001005 -
Lele26g1720 327 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 142 194 IPR006447 GO:0003677
Lele26g1720 327 ProSiteProfiles SANT domain profile. 147 195 IPR017884 -
Lele26g1720 327 CDD SANT 146 191 IPR001005 -
Lele26g1720 327 FunFam transcription factor MYB1R1 145 196 - -
Lele26g1720 327 SUPERFAMILY Homeodomain-like 35 90 IPR009057 -
Lele26g1720 327 MobiDBLite consensus disorder prediction 121 146 - -
Lele26g1720 327 Pfam Myb-like DNA-binding domain 146 191 IPR001005 -
Lele26g1720 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 139 195 IPR017930 -
Lele26g1720 327 Gene3D - 28 95 - -
Lele26g1720 327 FunFam Transcription factor SRM1 28 95 - -
Lele26g1720 327 SUPERFAMILY Homeodomain-like 140 194 IPR009057 -
Lele26g1720 327 Gene3D - 145 195 - -
Lele26g1720 327 SMART sant 143 193 IPR001005 -
Lele26g1720 327 SMART sant 32 84 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1720 Lele-ChrLele26 20724549 20725724 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele26g1720 Myb_DNA-binding 1.6e-12 CL0123