Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1689 ATGCGTGTTCTACAGAGAGTATTTCCTCAACCATCACAACGTGTTGTGATCTTCGCTTATTACCGCTCCTTTCTCCGTTCTCTCTTCTATCTTCTCCGGCCTTTCTACTGTACTTCCCTTCACTTCTATACCTTCTCTCTCTCTCTCACACCCGCTTTCTCTCTCTTCATCACAATGTGTGGAATACTCGCTGTGCTTGGTTGTACCGACGACTCTCGAGCCAAGAGAGTCCGCGTCCTCGAACTCTCTCGAAGATTGAGGCATCGTGGTCCTGATTGGAGTGGTCTCCACCAACATGGTGATTGTTACTTGGCTCATCAACGGCTGGCCATTATTGATCCTGCTTCTGGTGATCAACCTCTCTTTAATGAGGACAAATCTGTCGTCGTCACGGTGAATGGAGAGATATACAACCATGAAGAGCTTAGGAAACAACTGTCCAACCACAAGTTCAGGACAGAAAGTGACTGTGACGTTATTGCACATTTGTATGAGGAATATGGAGAGAATTTTGTGGACATGCTGGACGGCATCTTTTCGTTTGTTCTTCTGGACACCCGAGACAACAGCTTCATTGTTGCAAGAGATGCTATTGGTGTCACTTCTCTTTACATTGGCTGGGGACTAGATGGGTCTGTTTGGATTTCATCTGAGCTAAAAGGGCTCAATGATGATTGTGAGCATTTCGAGTGTTTCCCTCCTGGCCACTTGTACTCAAGCAAAGAAGGAAGCTTCCGTAGGTGGTACAATCCTCCATGGTTCTCTGAGGTTGTTCCATCAACCCCTTATGATCCCTTAGCTCTGAGGCATGCTTTTGAGAAGGCAGTCATAAAAAGGCTTATGACAGATGTGCCTTTCGGTGTTTTACTTTCTGGAGGTTTGGACTCATCCTTGGTTGCATCCATCACCGCTCGCTACCTTGCCGATACGAAAGCCGCCAAACAGTGGGGACCAAAACTACACTCCTTCTGTGTAGGCCTTGAGGGCTCACCAGATCTGAAGGCTGCAAAAGAAGTTGCAGACTACATAGGGACTGTTCACCATGAATTTCACTTCACTGTCCAGGATGGCATAGATGCCATTGAAGATGTAATCTATCATATAGAAACGTATGATGTGACTACAATCAGAGCTAGTACCCCTATGTTCCTCATGTCACGCAAGATTAAATCGCTCGGAGTGAAAATGGTTATCTCTGGAGAGGGATCAGATGAAATTTTTGGCGGGTATCTGTACTTCCACAAGGCCCCTAACAAGAAGGAGTTCCATGAAGAAACTTGCCGCAAGATTAAGGCACTTCATCAGTATGATTGCTTGAGAGCCAATAAAGCAACATCTGCTTGGGGCCTGGAAGCTAGAGTCCCATTCCTGGACAAGGAGTTTATCAATGTTGCAATGAACATTGATCCTGAGTATAAAATGATAAAACGCGATGAAGGCCGGATTGAGAAGTGGGTCCTAAGGAGAGCCTTTGATGATGAAGAGCATCCTTATCTTCCAAAGCACATTTTATACAGACAGAAAGAACAATTCAGTGATGGGGTTGGTTATAGTTGGATTGATGGCCTTAAATCCCATGCTGCAAAACATGTGAGTGACAAAATGATGCTCAATGCTGCTAACATCTTCCCCCACAACACTCCAACCACCAAAGAGGCATATTATTATAGAATGATCTTTGAGAGGTTCTTCCCTCAGAACTCTGCAAGGCTTACTGTTCCTGGAGGCGCTAGTGTGGCTTGCAGCACGGCGAAAGCAGTGGAGTGGGACGCAGCCTGGTCGAACAATCTGGATCCTTCTGGTAGAGCAGCACTTGGAGTGCATGTTTCTGCTTATGACAACCAAAACAAAGCTGTAGAGCCAGAGAAGATCATACCCAAGTTGGAAATGCCTTTTGGAGTAGCAATCCAGAGCTAA 1917 0.4575 MRVLQRVFPQPSQRVVIFAYYRSFLRSLFYLLRPFYCTSLHFYTFSLSLTPAFSLFITMCGILAVLGCTDDSRAKRVRVLELSRRLRHRGPDWSGLHQHGDCYLAHQRLAIIDPASGDQPLFNEDKSVVVTVNGEIYNHEELRKQLSNHKFRTESDCDVIAHLYEEYGENFVDMLDGIFSFVLLDTRDNSFIVARDAIGVTSLYIGWGLDGSVWISSELKGLNDDCEHFECFPPGHLYSSKEGSFRRWYNPPWFSEVVPSTPYDPLALRHAFEKAVIKRLMTDVPFGVLLSGGLDSSLVASITARYLADTKAAKQWGPKLHSFCVGLEGSPDLKAAKEVADYIGTVHHEFHFTVQDGIDAIEDVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKKEFHEETCRKIKALHQYDCLRANKATSAWGLEARVPFLDKEFINVAMNIDPEYKMIKRDEGRIEKWVLRRAFDDEEHPYLPKHILYRQKEQFSDGVGYSWIDGLKSHAAKHVSDKMMLNAANIFPHNTPTTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTAKAVEWDAAWSNNLDPSGRAALGVHVSAYDNQNKAVEPEKIIPKLEMPFGVAIQS 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1689 638 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 258 537 - -
Lele26g1689 638 Pfam Glutamine amidotransferase domain 106 223 IPR017932 -
Lele26g1689 638 Pfam Asparagine synthase 268 419 IPR001962 GO:0004066|GO:0006529
Lele26g1689 638 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 60 243 IPR017932 -
Lele26g1689 638 FunFam Asparagine synthetase [glutamine-hydrolyzing] 60 250 - -
Lele26g1689 638 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 58 253 IPR029055 -
Lele26g1689 638 CDD Asn_Synthase_B_C 269 514 IPR001962 GO:0004066|GO:0006529
Lele26g1689 638 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 60 250 IPR029055 -
Lele26g1689 638 CDD AsnB 60 250 IPR033738 -
Lele26g1689 638 PANTHER ASPARAGINE SYNTHETASE 59 612 - -
Lele26g1689 638 Gene3D HUPs 254 571 IPR014729 -
Lele26g1689 638 FunFam Asparagine synthetase [glutamine-hydrolyzing] 253 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1689 Lele-ChrLele26 20424285 20428780 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g1219 01 7353530 7358347 Lele26g1689 26 20424285 20428780 CCT
Lele02g1489 02 19089372 19094181 Lele26g1689 26 20424285 20428780 CCT
Lele03g1232 03 7316094 7320925 Lele26g1689 26 20424285 20428780 CCT
Lele04g1474 04 19938523 19943327 Lele26g1689 26 20424285 20428780 CCT
Lele26g1689 26 20424285 20428780 Lele27g0400 27 3629132 3633399 hybridization
Lele26g1689 26 20424285 20428780 Lele28g1693 28 19864495 19868976 hybridization