Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1687 ATGTCGTGCTCCGTCGCCCTCTCCAACTCTCCGGTCTTCTCTCCGTCGTCTTCTCTCTTCTGCAACAAGCCCTCCGTCTTCATCTCTTCCTCGCCGGAATCCCTTTCTCTCTCTTTGTCCCACCTCAAGCCTTCCGCTTCTGCTTCATCTTCTTCGCCTCCTTCACCTTCCTCGCCTTTCCGCCTTCGCCTCCTCAAGCCTCCTCCTCCTACCGCCTTTTCCAACTCCGCCTCCGCTCCTTCCTCCTCCACCTCGCCTAACGGTACCGTTTTGAAGAGGAAGAGGCCCACTAGGATTGATATTCCCGTTGTCTCGTCTCTCACTTTTGGGGTTCCTGCGACGCCGTCTGCTTCGGTGGCTCGAGATGTTCTAGAGGCCGAAGGGCTTGGGTTTTCTGTTTATTGTAAGAGAGGCAGGCGAGAGTACATGGAAGATCGTTATTCTGCTGCCGTCAATCTTCAAGGACAACCCAAACAGGCTTTCTTTGGCATATTTGATGGGCACGGAGGTTCAAAAGCTGCTGAATTTGCTGCACATAACTTAGGAAAGAACGTCATGGATGAAGTAACAAATAGAGATGAAGATGACATAGAGGAGGCAGTGAAACATGGTTACCTGAACACTGATTCTGATTTCTTAAAAGAGGATCTTCATGGTGGCTCCTGCTGTGTAACAGCACTGATTAAGAACGGAAACCTCATTGTTTCTAACGCCGGCGATTGCCGTGCTGTTATTAGCCGAGGTGGAGTTGCAGAAGCCCTCACATCTGATCACAGACCTTCAAGGGAAGATGAAAGAGACAGAATTGAGACCACGGGTGGCTATGTTGATTTATGCCGTGGGGTTTGGAGGATCCAAGGATCTCTAGCAGTTTCTAGAGGAATTGGAGATAGGTATTTGAAGCAATGGGTTATAGCTGAACCTGAGACTAAAGTTCTCAGAATTGAACCTGAACATGACTTGTTGATCTTAGCTTCAGATGGATTATGGGATAAGGTTACTAATCAAGAAGCTGTGGATATTGCTCGTCCTCTTTGCAATGTGGGTGGTAGTAGTAATATTGCAAAACCATTGATGGCCTGTAAAAAGCTTGTAGATTTGTCTGTTTCAAGAGGCTCAACGGATGACATAAGCGTTATGCTAGTAAAACTGGGACACTTAATGTAA 1167 0.4756 MSCSVALSNSPVFSPSSSLFCNKPSVFISSSPESLSLSLSHLKPSASASSSSPPSPSSPFRLRLLKPPPPTAFSNSASAPSSSTSPNGTVLKRKRPTRIDIPVVSSLTFGVPATPSASVARDVLEAEGLGFSVYCKRGRREYMEDRYSAAVNLQGQPKQAFFGIFDGHGGSKAAEFAAHNLGKNVMDEVTNRDEDDIEEAVKHGYLNTDSDFLKEDLHGGSCCVTALIKNGNLIVSNAGDCRAVISRGGVAEALTSDHRPSREDERDRIETTGGYVDLCRGVWRIQGSLAVSRGIGDRYLKQWVIAEPETKVLRIEPEHDLLILASDGLWDKVTNQEAVDIARPLCNVGGSSNIAKPLMACKKLVDLSVSRGSTDDISVMLVKLGHLM 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1687 388 Gene3D - 122 388 IPR036457 -
Lele26g1687 388 ProSiteProfiles PPM-type phosphatase domain profile. 130 384 IPR001932 -
Lele26g1687 388 MobiDBLite consensus disorder prediction 42 95 - -
Lele26g1687 388 CDD PP2Cc 130 384 IPR001932 -
Lele26g1687 388 ProSitePatterns PPM-type phosphatase domain signature. 161 169 IPR000222 GO:0043169
Lele26g1687 388 PANTHER PROTEIN PHOSPHATASE 2C 81 383 IPR015655 GO:0004722|GO:0006470
Lele26g1687 388 SMART PP2C_4 120 382 IPR001932 -
Lele26g1687 388 MobiDBLite consensus disorder prediction 71 91 - -
Lele26g1687 388 FunFam probable protein phosphatase 2C 25 123 387 - -
Lele26g1687 388 Pfam Protein phosphatase 2C 131 377 IPR001932 -
Lele26g1687 388 MobiDBLite consensus disorder prediction 42 58 - -
Lele26g1687 388 SUPERFAMILY PP2C-like 126 385 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1687 Lele-ChrLele26 20368465 20370258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1687 1 388 PP2C-type Phosphatase Gene Family AT2G30020 65.271 2.60e-170 479