Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele26g1685 | ATGGTGACCACGATGAGCTCTCTGCGTGATTCTGATTCTTCAATGGCTTCTTCTTCTTGGGTTCGAGGTCCGTGCTTAGGGAAGGGCTCATTTGGTACGGTGACTATTGGAGTAAGTAAATCCGACGGTCGGGTTTTTGCGGTGAAGTCCGTGGATCTTCAATCGGGTCAGGTGGCAGCGTTAGAGAATGAGATTCGGATCCTTCGGTGTATGTCGTCGCCGTACGTGGTGACCGTCCTCGGCGATGATGCTACGACGTCGTATCGGAACTTGTATTTGGAGTACCTACCAGGTGGCACCCTTGCTGACCTAGCATCTCTAAAGAAGAATGGCAGGGGATATGCTGACGTGGATGAGCGTGTGGTGAGGTACTTCACCTGGTGTGTGGTGAACGCGCTGAGGTACGTTCACGCAAGGGGCGTTGTTCACTGTGATGTTAAAGGGAAGAACATTCTAGTTGGGCTTAATGGCGGTGTTGCTAAGCTCGCCGACTTTGGTTCGGCGGTGGAGCAGAGCGCCTCCAGTGCGGTGGCGGTGCGGATATTGCCACGTGGAAGCCCGATGTGGATGGCGCCAGAGGTGATTCGGCAGGAGTCTCAGGGACCAGAATCTGACGTGTGGTCCTTAGGATGTACGGTTATAGAGATGGTCACCGGGAAGCCGGTCTGGGATGACGACGACGGATTTAACACGCTCAGTCGAATCGGATACTCCGACGACTTGCCAGAGTTTCCGAGTCTATTGTCAGAACTCGGACACGACTTCCTCGGCAGGTGCCTGAGGAGAGAACCAAGCGAGCGGTGGAGCTGTGATCAGCTGCTGCAGCATCCATTTCTGCTTCCTACTCCTCCAAATAAGCTCACAGAATCATCTCCTCGGTGCATCCTCGATTGGATAAACTCAGACGAATTCAAGGAAGAAGAAGAAAAAGAAGGAATCAGAATCAACAATGAAAACTCAGCGAGTGAGAGAATCAGTGAATTAGCTTCAAAATCAAGGGCAAATTGGGAATTCGAAAATGATTGGTTGGAGGTGAGGGCATTGGCGTCCAACACAGAATCAATAGTAGCAGTTACCGGTAGTGGGAGGGAAGACGATGACGAAGAAGAAGGGACAAGTTCAGAATATGCTGATTGGGGGACCGCAGAAGGGGGGATAAAAGAATTAGTGCTAAGTTGGGAATATTCCAGAAAGGGCAGGGCTAACCTGGGGATATGGAATTGGGTAGAGGATCAAAGTGAAAATGATTGGAGATTTGAGTATGGGCTGCACAAGATGGATCTGTTGAGAAAGATAAGATCAATAACAAACATTTACAGCTTGTGGTGTTATTGTTGGGCTATGTGA | 1347 | 0.5004 | MVTTMSSLRDSDSSMASSSWVRGPCLGKGSFGTVTIGVSKSDGRVFAVKSVDLQSGQVAALENEIRILRCMSSPYVVTVLGDDATTSYRNLYLEYLPGGTLADLASLKKNGRGYADVDERVVRYFTWCVVNALRYVHARGVVHCDVKGKNILVGLNGGVAKLADFGSAVEQSASSAVAVRILPRGSPMWMAPEVIRQESQGPESDVWSLGCTVIEMVTGKPVWDDDDGFNTLSRIGYSDDLPEFPSLLSELGHDFLGRCLRREPSERWSCDQLLQHPFLLPTPPNKLTESSPRCILDWINSDEFKEEEEKEGIRINNENSASERISELASKSRANWEFENDWLEVRALASNTESIVAVTGSGREDDDEEEGTSSEYADWGTAEGGIKELVLSWEYSRKGRANLGIWNWVEDQSENDWRFEYGLHKMDLLRKIRSITNIYSLWCYCWAM | 448 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele26g1685 | 448 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Lele26g1685 | 448 | MobiDBLite | consensus disorder prediction | 358 | 378 | - | - | |
| Lele26g1685 | 448 | ProSitePatterns | Protein kinases ATP-binding region signature. | 26 | 49 | IPR017441 | GO:0005524 | |
| Lele26g1685 | 448 | PANTHER | CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED | 13 | 367 | - | - | |
| Lele26g1685 | 448 | FunFam | Serine threonine protein kinase putative | 18 | 329 | - | - | |
| Lele26g1685 | 448 | Pfam | Protein kinase domain | 25 | 279 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lele26g1685 | 448 | Gene3D | Transferase(Phosphotransferase) domain 1 | 14 | 351 | - | - | |
| Lele26g1685 | 448 | SUPERFAMILY | Protein kinase-like (PK-like) | 15 | 300 | IPR011009 | - | |
| Lele26g1685 | 448 | SMART | serkin_6 | 20 | 279 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lele26g1685 | 448 | CDD | STKc_MAPKKK | 20 | 279 | - | - | |
| Lele26g1685 | 448 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 141 | 153 | IPR008271 | GO:0004672|GO:0006468 | |
| Lele26g1685 | 448 | ProSiteProfiles | Protein kinase domain profile. | 20 | 279 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele26g1685 | Lele-ChrLele26 | 20331887 | 20333359 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele26g1685 | 14 | 392 | MAP Kinase Kinase Kinase | AT1G07150 | 51.163 | 7.33e-116 | 347 |
Transcription factors information