Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1678 ATGGCAAACTCTGTTGAGCTATCAGCCCTAAATCGCATAAAATTGCATCTTCTAGGTGAATTGTCTCCAGTTGGCACTTTCTCCAGAAGCCTTAGCAGTTCAGCAAGCGATGATACTCAACAATTCTGGTTTGGTGAATCAAACGGAGCAATTTCATCGAGTTCTGACTCTTCGATCACTGTGTCCGATTACCTCCCTGAACCGTTCGAATTCCCATCCAACTCCACAAATCTATTTGAGTACGAGTTCAAAAATCAAGTGATTGACCTCTCAACGCCCAAATCGGAAACGGAAACTTCACAATTTGATGCCAATTTCTCCCAATTCGAAGCAGACTCACAGGCAACATCAACCTCTGGCTCACAGTCAAGCAGTTGCACGTTCGAGTTTCAAATTAGACTCCAAAGCGTCGAGAAGAAATCTCATTTCAATCGGAAACCGTCGCTGCAAATCACGCCGCCGAAAAAAACCGAGCTGATCCAATTTGGAAATACGGATCAACAACGGGAGGTTTCAGAAATATTCGTGCAGAATAATTCAAACCATGAAGAGGAGAAAAAGCACTACAGAGGGGTCCGACAGAGACCGTGGGGAAAGTTCGCCGCCGAGGTTCGGGACCCGAACAAACGTGGATCTAGGTTGTGGCTCGGAACGTTCGACACAGCGATCGAAGCAGCAAAAGCCTACGATCGAGCTGCGTTTAGGCTTCGCGGCTCCAAAGCCATACTCAATTTCCCTCTGGAAGCAGGGACTTCGGGTTCGACGGACGGCACGGAGGAGAAAAAACGCCGGCGGGAAGATGAAGAAATAGAAATAAAAACACCAGTGGTCAAGAAAGAGAAAACGGCGGAATCTGACGTGGGAAGGATAGCGGATATGCCGTTAACGCCGTCAATGTGGACGGGGTTCTGGGAGAACGATTTGAAGGACATTTTCTCAGTCCCGCCGTTATCTCCTCACCAGCCTTTGGGCTATCCACAGCTTATGGTGGTATGA 996 0.4799 MANSVELSALNRIKLHLLGELSPVGTFSRSLSSSASDDTQQFWFGESNGAISSSSDSSITVSDYLPEPFEFPSNSTNLFEYEFKNQVIDLSTPKSETETSQFDANFSQFEADSQATSTSGSQSSSCTFEFQIRLQSVEKKSHFNRKPSLQITPPKKTELIQFGNTDQQREVSEIFVQNNSNHEEEKKHYRGVRQRPWGKFAAEVRDPNKRGSRLWLGTFDTAIEAAKAYDRAAFRLRGSKAILNFPLEAGTSGSTDGTEEKKRRREDEEIEIKTPVVKKEKTAESDVGRIADMPLTPSMWTGFWENDLKDIFSVPPLSPHQPLGYPQLMVV 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1678 331 PRINTS Ethylene responsive element binding protein signature 189 200 IPR001471 GO:0003700|GO:0006355
Lele26g1678 331 PRINTS Ethylene responsive element binding protein signature 228 248 IPR001471 GO:0003700|GO:0006355
Lele26g1678 331 MobiDBLite consensus disorder prediction 255 270 - -
Lele26g1678 331 PANTHER DNA-BINDING DOMAIN 125 262 IPR044808 GO:0003700|GO:0009873
Lele26g1678 331 CDD AP2 187 246 IPR001471 GO:0003700|GO:0006355
Lele26g1678 331 ProSiteProfiles AP2/ERF domain profile. 188 246 IPR001471 GO:0003700|GO:0006355
Lele26g1678 331 FunFam Ethylene-responsive transcription factor 2 187 248 - -
Lele26g1678 331 Pfam AP2 domain 188 238 IPR001471 GO:0003700|GO:0006355
Lele26g1678 331 MobiDBLite consensus disorder prediction 247 270 - -
Lele26g1678 331 SMART rav1_2 188 252 IPR001471 GO:0003700|GO:0006355
Lele26g1678 331 SUPERFAMILY DNA-binding domain 188 247 IPR016177 GO:0003677
Lele26g1678 331 Gene3D AP2/ERF domain 187 248 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1678 Lele-ChrLele26 20219539 20220534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1678 1 331 AP2-EREBP Transcription Factor Family AT5G47230 42.604 6.11e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele26g1678 AP2 3.3e-15 CL0081