Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1661 ATGAGAGTGGAATGTGGGCGTACATGGAAACTACACAATATTGCATTTGCATGGTTCACCGACCCATCACGCGCCTTGGCGGTGATAATGGGAGGTTCTTCTCCTTGTGCTTCCTGCAAGTTGCTACGACGTCGTTGCACCAAGGAGTGCATTTTCGCTCCTTACTTTCCTTCTGATGATCCCCACAAATTTGCCATCGTTCACAAGGAACTTCCGGTGCATCAAAGAGCGGATGCCGTGAGCAGTCTAGTTTACGAGGCGAATGCTAGGGTTAGAGATCCGGTGTATGGATGCGTAGGAGCTATATCGTATCTACAAAGTCAAGTTTCACAGTTAAAAATGCAGCTTGAAGTGGCTCAAACAGAGATTATGTGCATTCAGATGCAGCACGATCCTACAAACTTATCATCAACTCAATATTATTCATAA 429 0.4545 MRVECGRTWKLHNIAFAWFTDPSRALAVIMGGSSPCASCKLLRRRCTKECIFAPYFPSDDPHKFAIVHKELPVHQRADAVSSLVYEANARVRDPVYGCVGAISYLQSQVSQLKMQLEVAQTEIMCIQMQHDPTNLSSTQYYS 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1661 142 Coils Coil 102 122 - -
Lele26g1661 142 Pfam Lateral organ boundaries (LOB) domain 35 120 IPR004883 -
Lele26g1661 142 ProSiteProfiles LOB domain profile. 34 123 IPR004883 -
Lele26g1661 142 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 33 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1661 Lele-ChrLele26 19878831 19880503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1661 32 133 AS2 family AT2G30130 78.947 3.53e-62 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele26g1661 LOB 4e-27 No_clan