LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele26g1654	ATGGCTGAAAGCGGTGAGGAGAAGTTATTGGCTATGGCGCGCCACATAGCAAAGACGTTGGCTCAAGATAACAGCATGGCTGATGATATTCTGCAAATTTTCTCCAACTTCGATGGGAGATTTTCGCGGGAGAAGTTGTCGGAGATAAGCGGCGGCGATCATCCCCGAGGCTATGCTTCTCTTGAAAATACCCTCAACTCTGTCGATCGTCGGATCACGCACTACGTTTCATTCGATCGTCCGATCTGGGCTGACTCGGCCGACGCCGCTGCCTTTCTCGAAGCCATCGATGAGTTGATTGCCACTCTTAGTGAGTGGAGCCCCATGGCGGCGGATGAGACTGTTACCGCTTTCTTGGTACGAGCCGATGACATGCTTCAGCAGGCGATGTTTCGTGCCGAGGACGAATTCAGGTCTCTGATGGAAAGCGGGGGCGAGTCGTTTGACCTGACTCGGGCGGACTGGAAAAGCGAGTCAACTCGCAACTTGCCTTCTGACTCGGAGGACGAAGATGCTGAAGTCGAAGCGGTTATTAGAAACGATGACGATTATCAGATTCCGATGGCGAAGCCGGTGGCTAATTACGACATCATAGTTGATGCTCTACCTTCTGGAACAATCCAGGATCTTCACGAAATAGCGAAGCGCATGGTGGCTGCTGGGTTTGGGAAGGAGTGCGCACACGTGTATAGCAGCTGCCGAAGAGAATTCGTGGAGGAGAGCTTGTCGCGATTAGGGTTACAGAAGTTAAGTATCGAAGACGTTCACAAGATGCCATGGCAGGACCTTGAAGATGAGATTGCAAGATGGATCAATTTTTCCAATGTTGCTCTCCGGATTATATTTCCCAGTGAACAACGAATCTGCAATCGCATCTTCTTCGGTTTATCCTCTGCTTCTGATCTCTCTTTCATGGAGATTTGCCGAGGATCAACACTTCAGCTACTCAATTTCGCCGACGCCGTTGCAATCGGGAGCCGCTCACCAGAGCGTTTGTTCCGAATCCTTGATGTGTTTGAAACATTGAGGGACCTTATTCCCGTATTCGAATCCTTGTTTTCCGATCAGTACTCTGTGTTTCTGAAAAAAGAAGCAATCACGATCTGGAACAGATTAGGTGAAGCAATTAGAGGCGTTTTCATGGAACTTGAGAACTTGATCCGACGTGACCCAACGAAAGCAGCAGTTCCCGGCGGTGGGCTTCACCCAATTACCCGCTACGTGATGAACTACCTCCGAGCGGCATGTCGTTCTCGTCAGACCCTCGAGCAGGTTTTTGAAGACAATGGACCATCACTGAAGGACTACAAGAATCTTGACGAAAGCAAAGTATCCTCATCTTCGCTTTCGGTGCAAATGGCATGGGTCATGGAAATATTAGAGAGTAATTTGGAAGCCAAATCCAAAATCTACAAAGACCCAGGATTGTGCTCTGTTTTTATGATGAACAATGGGAGGTACATAGTTCAAAAGGCAAGAGATACTGAACTTGGAACCCTTTTGGGTGATGATTGGATCCGAAAACACAATGCAAAAGTCCGGCAATACCATGTAAGCTATCAAAGAAGCTCATGGAGCAAATTGCTGGGTTTGTTGAAAATAGAGAGTGGATCATTATCGTCTAATGTAGTTGCAAAATCTATGAAGGAGAAGATCAAATCCTTCAACATGCAGTTTGAAGATATATGCAGGGTTCAATCCACATGGGTCATCTATGATGATCAACTAAGAGAAGAGATAAGGATTGCACTGGAAAGATTATTGCTTCCTGCGTATGGGAACTTCATTAGTAGGTTCGAGAATGTTCCAGAACTTGGGAAGCATGCTGAGAAATATATCAAGCATGGGGTGGAGGACATTGAAGCAAAGCTTCAGGATTTGTTTCACGGAAACAGTGGAGCAGCTGGTAGCCGAAGGGGATATAAATCTCAAGTTATCAGCTCATATCTGAGTATTGCCGCAGCATCGGCAAATACTCCTCATTTCATTCATCTTTGTTACATACCTCCTAGCGAATCTGTCAAAGTCAAGTTGGCTTTAGTTGGGAATGGTTTGACTTTTGATAGTGGTGGCTACAACATCAAGACTGGACCAGGCTGTTCAGTTGAAACCATGAATTTTGATGTGTGTGGCTCAGTTTCAGTTTTAGTGCAAGTTCATTTTGTTGTTGTTTGCGGGAATATAAGTGGAAACCAAAGAGCTATGCCTTTAGTATATGTCACTGAAACATTGTAA	2235	0.46	MAESGEEKLLAMARHIAKTLAQDNSMADDILQIFSNFDGRFSREKLSEISGGDHPRGYASLENTLNSVDRRITHYVSFDRPIWADSADAAAFLEAIDELIATLSEWSPMAADETVTAFLVRADDMLQQAMFRAEDEFRSLMESGGESFDLTRADWKSESTRNLPSDSEDEDAEVEAVIRNDDDYQIPMAKPVANYDIIVDALPSGTIQDLHEIAKRMVAAGFGKECAHVYSSCRREFVEESLSRLGLQKLSIEDVHKMPWQDLEDEIARWINFSNVALRIIFPSEQRICNRIFFGLSSASDLSFMEICRGSTLQLLNFADAVAIGSRSPERLFRILDVFETLRDLIPVFESLFSDQYSVFLKKEAITIWNRLGEAIRGVFMELENLIRRDPTKAAVPGGGLHPITRYVMNYLRAACRSRQTLEQVFEDNGPSLKDYKNLDESKVSSSSLSVQMAWVMEILESNLEAKSKIYKDPGLCSVFMMNNGRYIVQKARDTELGTLLGDDWIRKHNAKVRQYHVSYQRSSWSKLLGLLKIESGSLSSNVVAKSMKEKIKSFNMQFEDICRVQSTWVIYDDQLREEIRIALERLLLPAYGNFISRFENVPELGKHAEKYIKHGVEDIEAKLQDLFHGNSGAAGSRRGYKSQVISSYLSIAAASANTPHFIHLCYIPPSESVKVKLALVGNGLTFDSGGYNIKTGPGCSVETMNFDVCGSVSVLVQVHFVVVCGNISGNQRAMPLVYVTETL	744

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele26g1654	744	Pfam	Exo70 exocyst complex subunit	269	625	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Lele26g1654	744	FunFam	Exocyst subunit Exo70 family protein	76	635	-	-
	Lele26g1654	744	Gene3D	Zn peptidases	636	727	-	-
	Lele26g1654	744	Gene3D	Exocyst complex component Exo70	82	635	-	-
	Lele26g1654	744	SUPERFAMILY	Zn-dependent exopeptidases	643	724	-	-
	Lele26g1654	744	PRINTS	Cytosol aminopeptidase signature	678	695	IPR011356	GO:0005737\|GO:0019538\|GO:0030145\|GO:0070006
	Lele26g1654	744	PRINTS	Cytosol aminopeptidase signature	702	723	IPR011356	GO:0005737\|GO:0019538\|GO:0030145\|GO:0070006
	Lele26g1654	744	SUPERFAMILY	Cullin repeat-like	83	629	IPR016159	-
	Lele26g1654	744	Pfam	Cytosol aminopeptidase family, catalytic domain	642	722	IPR000819	GO:0006508\|GO:0046872\|GO:0070006
	Lele26g1654	744	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	59	630	IPR004140	GO:0000145\|GO:0006887

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele26g1654	Lele-ChrLele26	19785393	19790166	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele26g1654	1	632	EXO70 exocyst subunit family	AT5G58430	66.877	0.0	886

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele26g1654	26	19785393	19790166	Lele27g0430	27	4117064	4120046	hybridization