Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1650 ATGGCTTCATGCTCAGCTGCTCTGCAATGGCTGAGCCTTGTGGGAATGATATGGCTTCAAGCCATTAATGGAACAAACAACAACTTTCCTGCATATTCCTCTCAGTTAAAGCAGATTCTTTCCATCTCACAATTACAGCTCAACAACTTAGCTTTCGCCTCCGACGCCGGAAAACTCTTCGGCTGGTTTTCTGGTGTCGCCGTCGCATACCTTCCTCTTTGGCTTGTCCTCATCATTGGTTCAATTCTTGGGCTAATAGGTTATGGAGTTCAATATCTCTTCATAACAAACCATATCTCTTCTCTTTCATATTGGCATGTCTTCTTCCTCACTGTTCTAGCAGGAAACAGCATTTGTTGGATTAACACTTTCAGTTACGTTGTCACCATCAGAAACTTCCCGTCCGATCACCGGCAAGTCGTCGTCGGATTATCAACTAGTTACCAAGGATTAAGTGCCAAGATTTATACCAACATAGTTGAAACTTTTTCCCCACACAAAAAAGCTAGAGCCTTCCTTTTTCTCAACTCTGTAACACCTCTTATAGTTAGCCTAATTGCAGCCCCTTTGGTTAGAGAAATCAAAACCTTAAAATCTTCAAAAATGAATGTTGGGTTCATCGTCATGTTTGTGATCACCATTGGAACTGGGATTTATGCTGTGATTACCAGCTTACAGTTCATATCAGAAAAGTTGTCACCTTTGAGTAATTTGATTGGAATTTTAGTTACCCTTTTGGTTCCTTTGTTAGTTCCAATCACAGAGAAGGTAAAATCATTAGAAAAGGCATGGCAAGTGAACAGAGAAAGGCAAAGAGTTTATAATTTTACTGTAGAAGAGAACAGTGATAACAATGGAGTTATCAGACCAGAGGAAGAAATAAAAGATGAGGAAGAAGATGAAGATGGAGATTTTGGGGTTGGTGTGAGAGAAGAAATTGGGTGGAGGTTGATGATGAGAAGGGTTGATTTCTGGTTATATTTCTTTGTGTATTTTTTTGGAGCAACGATTGGTATGGTGTATATGAACAACTTGGGACAAATTGCAGAATCCAGAGGTTGTTCTGCAACTTCATCTCTGGTTTCATTGTCTTCTTCTTTTAGTTTCTTTGGTCGTTTGATGCCTTCTCTCTTGGATTACTTCTACAGGGGAGGATCCAGAATTATTTCTTCAAGACCAGCTTCAATGGTAGCATTAATGGCGGCAACATCAGGATCATTCTTTCTACTTCTGAATCAAAAAGACATATCTCTATACATAAGCACAGCCATGATTGGAATCTGCACTGGTGCCATAACTTCCATAGCAGTGTCCACAACCACAGAACTCTTTGGCACAAAGAACTTCTCAGTGAACCACAATGTCCTCGTCACCAACATCCCCATCGGCTCCTTCTTGTTCGGCATATCTGCCGCGCTCGTCTACCGGAAACAAGGTGATGGACACGGCAAATGCTCCGGCATGGATTGTTACAGAAGCACCTTCATCTTGTGGGGTTCTCTTTGTTGTTTAGGCACTGTCTTGGCCTTGATTCTTCATGCAAGAACTCGCAAATTTTACTCACAAAAGCTTTAG 1575 0.4121 MASCSAALQWLSLVGMIWLQAINGTNNNFPAYSSQLKQILSISQLQLNNLAFASDAGKLFGWFSGVAVAYLPLWLVLIIGSILGLIGYGVQYLFITNHISSLSYWHVFFLTVLAGNSICWINTFSYVVTIRNFPSDHRQVVVGLSTSYQGLSAKIYTNIVETFSPHKKARAFLFLNSVTPLIVSLIAAPLVREIKTLKSSKMNVGFIVMFVITIGTGIYAVITSLQFISEKLSPLSNLIGILVTLLVPLLVPITEKVKSLEKAWQVNRERQRVYNFTVEENSDNNGVIRPEEEIKDEEEDEDGDFGVGVREEIGWRLMMRRVDFWLYFFVYFFGATIGMVYMNNLGQIAESRGCSATSSLVSLSSSFSFFGRLMPSLLDYFYRGGSRIISSRPASMVALMAATSGSFFLLLNQKDISLYISTAMIGICTGAITSIAVSTTTELFGTKNFSVNHNVLVTNIPIGSFLFGISAALVYRKQGDGHGKCSGMDCYRSTFILWGSLCCLGTVLALILHARTRKFYSQKL 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1650 524 SUPERFAMILY MFS general substrate transporter 11 518 IPR036259 -
Lele26g1650 524 Gene3D MFS general substrate transporter like domains 8 517 IPR036259 -
Lele26g1650 524 Pfam Nodulin-like 9 253 IPR010658 -
Lele26g1650 524 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 10 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1650 Lele-ChrLele26 19670752 19673164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1650 8 523 Nodulin-like Gene Family AT2G30300 49.526 4.00e-155 450
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1650 26 19670752 19673164 Lele27g0438 27 4430584 4433125 hybridization