Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1641 ATGGAGAATAAACCAAAAATATTAATGCAAAAGTATGAATTAGGAAGGTTATTAGGCCAAGGTACCTTTGGAAAGGTATACTATGCCCGCAGTACAATAACTAGCCTGAGTGTAGCTATTAAAATGATAAACAAGGACAAAGTTATGAAATCTGGACAAGCCGAACAGATCAAGCGGGAAATATCTGTAATGAGACATGTTAAACATCCCAATGTTATACAGCTTTATGAGGTTATGGCCACCAAAAGTATGATTTACTTTGTTATTGAATATGCTAAAGGTGGTGAACTCTTTAACAAAGTGGCCAAAGGAAAGCTCAAAGAAGATGTTGCTCATAAATTATTTCAGCAGCTAGTGAATGCCATAGACTTTTGTCATAGTAGAGGTGTTTACCACCGTGACATAAAACCGGAGAACCTTTTGTTGGATGAAAATGGGAACCTAAAGGTCTCTGATTTCGGATTGAGTGCGTTATCTGAATCCAAGAGACAGGATGGCTTACTACATACGCCTTGTGGCACGCCCGCCTATGTTGCTCCCGAAATCATCAAAAGGAAAGGTTATGATGGTGTCAAAGCTGATACTTGGTCTTGTGGAGTAGTTTTGTTTGTCTTACTGGCGGGTTATCATCCTTTTCATGATTCAAATTTGATAATGATGTATAGGAAGATTTCCAAGGCAGATTATAAATTCCCTAGTTGGTTCTCCCCAGAAGTACGTAGACTATTAATGAAGGTTTTGGATCCAGATCCTGATACTAGAATCCCCCTAGCTAAGATTAGGGAATCTTCTTTGTTTATGAAAGGGCCATCTAGAGATAGGAAACCTGAATCTGTGAACAAGAGTGTCTCCACATCAGGTACAAAGCCTTGTGATCAAACCGATGAAAGTGATAGGATAGCAGAAGAAGCAACACAAGAATCGGTTGTGCCCACAAGTATAAATGCTTTTGACATCATCTGCCGTTCTAAAGGTTTTGATCTATCTGGATTCTTTGAAGATAGTTTCAAGAAGAAAGAGGCCAGATTTTCTTCAAGGCAGCCAGCCTCAGTCATTATCTCCAAGCTGGAAGAAATCGCCAAGCGTCTGAGGCTGAAAATAAAGAAAAGAGGTGCAGGTTTGTTAAAATTAGAGGGCCTCAAGGAAGGTAGAAAAGGGATTCTTAGCGTTGACGTGGAGATCTTCGAGGCTGCTCCATTTTTCCATTTGGTTGAGATGAAAAAATCAAATGGAGACACTTTGGAATATCAGAGCATATTGAAAGAGGAACTTAGGCCTGCTCTTAAGGATATTGTTTGGGTTTGGCAAGGGGACCAGCAGCAACAATCACAACCATCAGAGGATCAGATACAGGTGCATGACCAGCCAGTGACAGAGTCCACATCTGTGACACATTCTTAA 1401 0.4033 MENKPKILMQKYELGRLLGQGTFGKVYYARSTITSLSVAIKMINKDKVMKSGQAEQIKREISVMRHVKHPNVIQLYEVMATKSMIYFVIEYAKGGELFNKVAKGKLKEDVAHKLFQQLVNAIDFCHSRGVYHRDIKPENLLLDENGNLKVSDFGLSALSESKRQDGLLHTPCGTPAYVAPEIIKRKGYDGVKADTWSCGVVLFVLLAGYHPFHDSNLIMMYRKISKADYKFPSWFSPEVRRLLMKVLDPDPDTRIPLAKIRESSLFMKGPSRDRKPESVNKSVSTSGTKPCDQTDESDRIAEEATQESVVPTSINAFDIICRSKGFDLSGFFEDSFKKKEARFSSRQPASVIISKLEEIAKRLRLKIKKRGAGLLKLEGLKEGRKGILSVDVEIFEAAPFFHLVEMKKSNGDTLEYQSILKEELRPALKDIVWVWQGDQQQQSQPSEDQIQVHDQPVTESTSVTHS 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1641 466 MobiDBLite consensus disorder prediction 268 306 - -
Lele26g1641 466 Pfam Protein kinase domain 12 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1641 466 MobiDBLite consensus disorder prediction 440 466 - -
Lele26g1641 466 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Lele26g1641 466 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 4 429 - -
Lele26g1641 466 Gene3D Transferase(Phosphotransferase) domain 1 92 288 - -
Lele26g1641 466 ProSiteProfiles Protein kinase domain profile. 12 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1641 466 SUPERFAMILY Protein kinase-like (PK-like) 8 296 IPR011009 -
Lele26g1641 466 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Lele26g1641 466 Gene3D Kinase associated domain 1, KA1 309 434 - -
Lele26g1641 466 ProSiteProfiles NAF domain profile. 309 333 IPR018451 GO:0007165
Lele26g1641 466 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Lele26g1641 466 Pfam NAF domain 311 369 IPR004041 GO:0007165
Lele26g1641 466 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1641 466 FunFam Non-specific serine/threonine protein kinase 309 433 - -
Lele26g1641 466 FunFam Non-specific serine/threonine protein kinase 92 273 - -
Lele26g1641 466 CDD CIPK_C 315 429 - -
Lele26g1641 466 Gene3D Phosphorylase Kinase; domain 1 3 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1641 Lele-ChrLele26 19395215 19396615 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1641 1 441 CBL-interacting serine-threonine protein kinases AT5G58380 67.105 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele26g1641 Pkinase 1.5e-71 CL0016