Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1639 ATGGAGCCAGAGATCGAACCTGATATGGAGGACAACATTAATGCCTTGTTCGGCAAATATGAACTTGGAAAACTTCTGGGTTGTGGAGCCTTCGCTAAGGTCTACCATGCCCGTAACCTCGAAACCTCCCAGAGTGTCGCCATTAAAGTCTTCAACAAGAAGAAGATCACCAGCTCCGGCCTCACCTCCCATATCAAGCGCGAGATCGTCATCATGAGCCGGCTCCGTCATCCCAACATCGTCGGGTTCCACGAGGTCTTCGCCACAAAGACGAAGATCTTCTTCGTCATTGAATTGGTTAAAGGTGGAGAATTATTCTCTAGAATAGCCAAGGGACGATTTTCTGAGGATCTTAGCCTGAAATATTTCCAGCAGTTGATCTCTGCCGTTGGGTACTGCCACTCCCGGGGTGTGTTCCACCGCGACTTGAAGCCGGAGAATCTTCTCCTTGATGAACATGGCAACCTCAAGGTTTCGGATTTCGGGTTAAGCGCCGTCAGAGATCAGATCCGACATGATGGGTTGCTTCATACGCTCTGTGGCACACCGGCCTATGTGGCGCCGGAGATTCTGTCCAAGAAAGGGTACGACGGAGCGAAGGTGGATGTGTGGTCGTGCGGTGTCATTCTCTTCACATTGGCTGCCGGATATTTACCCTTCAATGACCCAAATCTCATGGTTATATACAGGAAGATTCAAAAAGGAGAATTTCGGTGTCCAAGGTGGATGTCGCCGGAGCTAAGGCGATTCCTGTCGCGGCTGCTTGACACGAATCCTAATACCCGGATCACCGTTGGTGAGATTCTTCAGGATCCATGGTTCAAGCAAGGGTACAAGGAGGTGAAGTTCCAGGAGGATGATTTTGGGTTCGAGACGAAGAATAATGGAGAGAGGGAGATAATCCAATTGAATGCATTTGATCTTATATCCTTCTCCGCGGGATTGGACCTGTCCGGTTTGTTCTATAATGCGGCGGAGAGAAGCGAGCGGTTTGTATCATCTGAGTCGCCGGAGAAGATAATGGAAAAGGTGGAAAAGGTGGCGAAGGCGGAGGGTCTTGCTGTGAGAAGGAGGATGAAAGAGTATAGGGTGGTGGTGGAAGGAGTTAGGGACAATTTGGGAATGTCGGTAGAAGCTTACCGGTTAACGGATGAGCTGGTGGTGGTGGAGGCAAAGAGAGGTGGAGTGAACGGCATCGTTTTTATTGAGCGTCTTTGGAACAACAGGTTAAGGCCACTACTTCGAGAATGGGAGGTTAAATCTCCTCCATTTGGATCGTAG 1281 0.4965 MEPEIEPDMEDNINALFGKYELGKLLGCGAFAKVYHARNLETSQSVAIKVFNKKKITSSGLTSHIKREIVIMSRLRHPNIVGFHEVFATKTKIFFVIELVKGGELFSRIAKGRFSEDLSLKYFQQLISAVGYCHSRGVFHRDLKPENLLLDEHGNLKVSDFGLSAVRDQIRHDGLLHTLCGTPAYVAPEILSKKGYDGAKVDVWSCGVILFTLAAGYLPFNDPNLMVIYRKIQKGEFRCPRWMSPELRRFLSRLLDTNPNTRITVGEILQDPWFKQGYKEVKFQEDDFGFETKNNGEREIIQLNAFDLISFSAGLDLSGLFYNAAERSERFVSSESPEKIMEKVEKVAKAEGLAVRRRMKEYRVVVEGVRDNLGMSVEAYRLTDELVVVEAKRGGVNGIVFIERLWNNRLRPLLREWEVKSPPFGS 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1639 426 SUPERFAMILY Protein kinase-like (PK-like) 17 283 IPR011009 -
Lele26g1639 426 ProSiteProfiles NAF domain profile. 298 322 IPR018451 GO:0007165
Lele26g1639 426 CDD CIPK_C 304 415 - -
Lele26g1639 426 Gene3D Phosphorylase Kinase; domain 1 17 101 - -
Lele26g1639 426 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1639 426 FunFam Aurora kinase A 13 103 - -
Lele26g1639 426 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Lele26g1639 426 FunFam Non-specific serine/threonine protein kinase 10 300 - -
Lele26g1639 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Lele26g1639 426 Gene3D Kinase associated domain 1, KA1 299 417 - -
Lele26g1639 426 SMART serkin_6 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1639 426 Pfam Protein kinase domain 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1639 426 Pfam NAF domain 302 356 IPR004041 GO:0007165
Lele26g1639 426 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 13 393 - -
Lele26g1639 426 Gene3D Transferase(Phosphotransferase) domain 1 102 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1639 Lele-ChrLele26 19378424 19379704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1639 2 411 CBL-interacting serine-threonine protein kinases AT2G30360 63.789 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele26g1639 Pkinase 1.2e-71 CL0016