Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1631 ATGAGGAAGAGACGTCCACGATGTGAGGAGCAGAGATCGGTCGCCGGTGAGAAGCTGTCAATTCCATTCGTAATCGTAGACCCCCGAAACTTGCCGGTCATTCTGGTTGGTTTTGTTGTTATTTCTGCAAATCTGGGAACTTGAATCAATTCTGTAATAATGGAGTCCGACATTTGCGTTAATACTTCGTGCGGAGTGGTCACTGCTTCCGAATGGAAGAAGGGGTGGCTGCTGCGATCTGGTGGATTTGCCAAACTCTGTGATAAGTGCGGATCTGCCTATGAAAATTTGGTTTTCTGTAGAAAGTTCCACATTAAAGAATCTGGTTGGAGGGAGTGCAATTTCTGCAAAAAGCCTATTCACAGTGGATGCATTGTATCTAAATCTTTGTTCGAATACCTTGATTTTGGCGGTATAGGCTGTATTAGCTGTGTAAAGTCTCCCCAACTTCATTTGATGAAAAATAGTGAAATTTCTAATGGGTCTATTACGTCAACCAAAAATGTTGCAAGTGACCGACATTCTTCTCATATTGATGGCACATTCTCTGTGGATAATGTTCATGAAGGGAAACTTATGCAACTGTGCAAAATTGTTGAGGCTAGTGAATCTAGCCACTGGCCTCAAGTTCAGAGAGATGGGATGCTTTTATCTAGTGGGCAGAATAGCCAGGAAGTTAAGCTTCCGATCCAGGAAGTGGATCCAGGATTTTCAAATGTGATGAATCCATCTGTTCAGTCATTAACATTTGCCAAATTAGAAAATAGCAGACTGGCATGTGAACTAAAAAATATGCATGAATTACCTGTGCAGCCATCATTGTGTATGTCTCTGGGAACTCCATCAGGAAACTCTGTCCTGCGTTCTGCTGGAGAGATTGTAGAAGGAAGTGGTGAGGAAAAGCCATCTCCTTTTCAACAAGGGCAAAGATCTCGGCCTATATTGCCCAAACCACCAAAGACTGGATTAACCATAAATCAAGAAACAAATAAAGGCATGCTTTCTCAGCTGCGAATAGCTCGGCCACCTGCTGAGGCAAGGGGCAAGAATCAGTTGCTTCCTCGATACTGGCCCAGGATCACTGATAAAGAGCTGGAGCAATTGTCTGGAGATTTGAAGTCTACTGTAGTGCCACTATTTGAGAAGGTGTTGAGTGCCAGTGATGCAGGTCGAATTGGCCGTCTTGTTCTTCCAAAAGCATGTGCTGAAGCTTATTTTCCTCCCATTTCTCAATCAGAAGGTCTTCCTTTGCGGATCCAAGATGTGAAGGGGAACGAGTGGACATTTCAGTTTCGATTTTGGCCCAATAACAACAGTAGGATGTATGTGTTGGAGGGCGTGACTCCTTGCATACAATCCATGCAATTATATGCTGGTGATACTGTTATTCGTCAACATAATCCCAGATATTGTGTTTTAATATTTAGTCGGATAGATCCGGGGGGCAAACTTGTTATCGGTTTCAGGAAGGCATCTAATTCTGTAGATACACAGAATGCCTCTACATCTGCACCTTCAAATGGCATTTCAATGAAGGATACTTCTCGTTCTGCGGTCACTGATAATCTTCACTTAGGAAACAATTATCCTGTTCCTCTCCAATCGATGAAGGGGAACAGGGAACCTTACTCAAATGGACTTTCAGAACATCTTCCTTTGAATAGTGCGAATCCTGGTTTGCCTAAGTCTGAAAATTGTGGAAGCATGACAAACAATGACTCTCTGCAGCAGCCAATTTCAGGTTCGGAGAAGAAGAGGACTCAAAATATTGGTTCTAAAAGTAAGAGGTTGCTCATTCATAGTGAAGATGCTCTGGAGTTGAGACTTACTTGGGAAGAAGCTCAGGACTTACTTCGTCCACCACCTAGGGTCAAGCCAAGCTTTGTTACAATAGAGGACCTTGTGTTTGAAGAGTATGATGAACCTCCTGTTTTTGGAAAGAGGACTTTTTTCACTACACATTCATCTGGGAGACAAGATCAATGGGCTCAATGTGATGATTGCTGTAAATGGCGAAGGCTGCCAGTAGATGTTCTACTTCCTCCTAAGTCTCTGTGTTCTGCACCAGAGGAGCTCAGTCCAAAGGAGTTGGAAAATCTGATGAGAATTACCAAAGATGCTGAAGATTCTTTTTACAGCGCTTGTTGGGATAAGGATTTAGTTGAGCACTGTGCATTTTATGGTAGTAAATCCCTGCAGGACTCATGGTCAGGATGCTTTCCCATTGGACATGTCAAGCTACAAGCGGATGGGTTGCTACTTCAGAATGGGGTTGTAATAGTCATCACCCCCTTTAGGGACATTATTGTTGATACTAGGTTAGTCTTACATAGAGATTGGCAAGTTTTATTGTTACATAGTCTTAGAGAAAACTTGACCACAACTGATTTACCTTGTGAAGATGACTCACAGGCAAACTCAGGTTTTAAGAAGAGAAGAATTGCAGAAGACAGGAAGCCACCCCAAGAGCATGAAACTTCCGGCTTAGATGCTCTTGCCAGTGTGGCAGTTTTGGGAGATAATTTTCTTGCCCCTGCTGAGTCATCTGTTGGAATCACCACCAAACATCCTCGACACCGTCCAGGATGCACCTGCATAGTGTGCATCCAACCGCCAAGTGGAAAGGGGAGACATAAGGCGACATGTACTTGCAATGTGTGCATGACCGTGAGACGCCGTTTCAAAACCCTTATGATGCGTAAAAAGAAACGCCAATCAGAACGTGAAGCAGATGCCACTACTGAGAAGGAACAAGTCCATCAGAGGGATGAATCGGAAACAAATGGCGCTTCAAGAGACGACGACAGAGTTCGTTTAGAAAAAGAGGGAGGCTTAGTCAGCAGTCATCCTGAGGTCAGTGAACCTAGTACTGGACAAATTGATCTGAATTGTCAGCCCAAACGTGAAGACATGCTTGTTGATGAAACAGAACTGAGCATGACAAGTAGTCATCTTGAAACAACTTACTATCTACAATAA 2979 0.434 MRKRRPRCEEQRSVAGEKLSIPFVIVDPRNLPVILVGFVVISANLGTXINSVIMESDICVNTSCGVVTASEWKKGWLLRSGGFAKLCDKCGSAYENLVFCRKFHIKESGWRECNFCKKPIHSGCIVSKSLFEYLDFGGIGCISCVKSPQLHLMKNSEISNGSITSTKNVASDRHSSHIDGTFSVDNVHEGKLMQLCKIVEASESSHWPQVQRDGMLLSSGQNSQEVKLPIQEVDPGFSNVMNPSVQSLTFAKLENSRLACELKNMHELPVQPSLCMSLGTPSGNSVLRSAGEIVEGSGEEKPSPFQQGQRSRPILPKPPKTGLTINQETNKGMLSQLRIARPPAEARGKNQLLPRYWPRITDKELEQLSGDLKSTVVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQSEGLPLRIQDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQSMQLYAGDTVIRQHNPRYCVLIFSRIDPGGKLVIGFRKASNSVDTQNASTSAPSNGISMKDTSRSAVTDNLHLGNNYPVPLQSMKGNREPYSNGLSEHLPLNSANPGLPKSENCGSMTNNDSLQQPISGSEKKRTQNIGSKSKRLLIHSEDALELRLTWEEAQDLLRPPPRVKPSFVTIEDLVFEEYDEPPVFGKRTFFTTHSSGRQDQWAQCDDCCKWRRLPVDVLLPPKSLCSAPEELSPKELENLMRITKDAEDSFYSACWDKDLVEHCAFYGSKSLQDSWSGCFPIGHVKLQADGLLLQNGVVIVITPFRDIIVDTRLVLHRDWQVLLLHSLRENLTTTDLPCEDDSQANSGFKKRRIAEDRKPPQEHETSGLDALASVAVLGDNFLAPAESSVGITTKHPRHRPGCTCIVCIQPPSGKGRHKATCTCNVCMTVRRRFKTLMMRKKKRQSEREADATTEKEQVHQRDESETNGASRDDDRVRLEKEGGLVSSHPEVSEPSTGQIDLNCQPKREDMLVDETELSMTSSHLETTYYLQ 992
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1631 992 Gene3D - 358 496 IPR015300 -
Lele26g1631 992 Pfam B3 DNA binding domain 380 475 IPR003340 GO:0003677
Lele26g1631 992 ProSiteProfiles B3 DNA-binding domain profile. 380 492 IPR003340 GO:0003677
Lele26g1631 992 Gene3D - 652 694 - -
Lele26g1631 992 MobiDBLite consensus disorder prediction 496 593 - -
Lele26g1631 992 CDD B3_DNA 378 490 IPR003340 GO:0003677
Lele26g1631 992 SMART B3_2 380 478 IPR003340 GO:0003677
Lele26g1631 992 MobiDBLite consensus disorder prediction 808 828 - -
Lele26g1631 992 MobiDBLite consensus disorder prediction 902 947 - -
Lele26g1631 992 FunFam B3 domain-containing transcription repressor VAL1 358 496 - -
Lele26g1631 992 ProSiteProfiles Zinc finger CW-type profile. 656 723 IPR011124 GO:0008270
Lele26g1631 992 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 56 705 - -
Lele26g1631 992 MobiDBLite consensus disorder prediction 808 825 - -
Lele26g1631 992 SUPERFAMILY DNA-binding pseudobarrel domain 378 463 IPR015300 -
Lele26g1631 992 MobiDBLite consensus disorder prediction 291 333 - -
Lele26g1631 992 MobiDBLite consensus disorder prediction 898 966 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele26g1631 Lele-ChrLele26 19165640 19176742 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1631 809 966 B3 DNA Binding Superfamily AT4G32010 40.994 1.99e-24 108
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele26g1631 B3 4.1e-12 CL0405