Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1625 ATGCCCGTACAATCTTCCCCTGTGAAACGGCCCGCATCTGATCAAAGTACGTCTTTTGAGGTTGAGGATGATCCATTATTATGCAAAACAAGTCGAAGAAGAAGAAACCATCAAAAGATTCTCAGAATCATACTCACAGACCATGATGCTACAGATTCCGACACTTGCAGCGATGAAGATGAAGAGAATCCTCGGAGACTAGGAAGAGTTAAGAAGCATATCACAGAGATCACTATGAATCTTCCCTCCTCATATCAGTCAACTTCCTCTTCTTCTCTTGCTTGTTTCACGAAAAACGATGGCCGTACTATCTTGAAGAGACCTAAGAAATCTCCGTCTCGTTGCCACAACAAATACAGGGGTGTTCGCCAGAGGCCGTGGGGACGGTGGGCCGCAGAGATCCGAGACCCGACACGTCGGAAGAGACTGTGGCTGGGAACCTTTGACACTGCGGAGGAAGCCGCCAGCCAGTACGACAAGGCTGCGATCATGCTCAAGGGTGCTAACGCAGTCACAAACTTCCCTAATTCCGTCGTGACGGAAAAAGAAACAAGGCGGGTAACAGTGGACACCCCACCGAGCACCACCGAGGGATTCGCCTCCTCAATTGCGTCTCCAACGTCAGTGCTGGCCTACGACAGTGATTATTCTACGGCGGAATTCGAGGGTTTCTTCTTCGACGACGTGGATGCGTTGGGTTTCGATATCAAGATGCCGTTGACAGACGTGAACTTGGCGGGGTTCGGTCAGACGAAATCGCAGGAGAGTGAAGCATTTGAAGACTTTGATGTGGACGAGTTCTTGACGTGGCCCAGCTAA 819 0.5018 MPVQSSPVKRPASDQSTSFEVEDDPLLCKTSRRRRNHQKILRIILTDHDATDSDTCSDEDEENPRRLGRVKKHITEITMNLPSSYQSTSSSSLACFTKNDGRTILKRPKKSPSRCHNKYRGVRQRPWGRWAAEIRDPTRRKRLWLGTFDTAEEAASQYDKAAIMLKGANAVTNFPNSVVTEKETRRVTVDTPPSTTEGFASSIASPTSVLAYDSDYSTAEFEGFFFDDVDALGFDIKMPLTDVNLAGFGQTKSQESEAFEDFDVDEFLTWPS 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1625 272 SMART rav1_2 118 181 IPR001471 GO:0003700|GO:0006355
Lele26g1625 272 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 38 214 - -
Lele26g1625 272 Gene3D AP2/ERF domain 117 177 IPR036955 GO:0003700|GO:0006355
Lele26g1625 272 MobiDBLite consensus disorder prediction 1 23 - -
Lele26g1625 272 ProSiteProfiles AP2/ERF domain profile. 118 175 IPR001471 GO:0003700|GO:0006355
Lele26g1625 272 SUPERFAMILY DNA-binding domain 118 177 IPR016177 GO:0003677
Lele26g1625 272 Pfam AP2 domain 118 167 IPR001471 GO:0003700|GO:0006355
Lele26g1625 272 MobiDBLite consensus disorder prediction 1 20 - -
Lele26g1625 272 FunFam Ethylene-responsive transcription factor 2 117 176 - -
Lele26g1625 272 PRINTS Ethylene responsive element binding protein signature 141 157 IPR001471 GO:0003700|GO:0006355
Lele26g1625 272 PRINTS Ethylene responsive element binding protein signature 119 130 IPR001471 GO:0003700|GO:0006355
Lele26g1625 272 CDD AP2 118 177 IPR001471 GO:0003700|GO:0006355
Lele26g1625 272 PIRSF PTI6 14 272 IPR017392 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1625 Lele-ChrLele26 19011892 19012710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1625 35 212 AP2-EREBP Transcription Factor Family AT4G27950 45.455 7.45e-37 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele26g1625 AP2 4.2e-15 CL0081