Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1623 ATGATCCAATGGCGTAAGGGCGAGTTGATCGGATGCGGTGCCTTTGGCCGAGTTTACATGGGCATGAATCTTGATTCTGGAGAGCTTCTAGCTGTAAAGCAGGTTCTGATCGCGGATAGTAGTGCTTCGAAGGAGAAGGCACAGGCTCACATAAAGGAACTTGAGGAAGAAGTTAAGCTTCTTAAAGATCTTTCTCATCCTAATATTGTTAGATATTTGGGTACAGTTAGGGAGGAGGACACCTTAAATATTCTTCTGGAGTTTGTACCAGGTGGATCCATATCATCACTTTTGGGGAAGTTTGGAGCTTTCCCCGAGGCTGTTATTAGAACTTTTATGAAGCAGTTACTACTGGGACTTGAGTACTTGCACAAAAATGGAATCATGCACAGGGACATTAAGGGGGCAAATATCCTTGTTGATAATAAAGGGTGCATAAAACTTGCAGATTTTGGGGCGTCCAAACAGTACCAAGAGGTTGCCGCTCTCTTCCACATAGGGACAACAAAGTCTCATCCACCAATTCCGGATCATCTCTCTGTTGGAGCATTGGAATTGCTTCCTACTGCAAGCTCCCTTACTGTAGGTGATCAAAGGTTCCCTGATCAGGTTTCTAGGTCAAATCATGTCGGTCATAGAGAGAGTATAAATATTGTTTCGAATAATGATCACAGTGCTGCTGTTTGTCCTCATGAATCATCTGACGCATTGAGGTTTTCTTCTTTAACTTCCCTTACGGGAAATGTTAGAAGGTTCCCAGATGGGTTTTCTGGATCAAGTGATCTCCATTGTCAAGCAACAGGGCAATTGGGATACACTTGCAATGCCCTCTTGTACAACTCAAGTGAATCAGAATAG 858 0.4336 MIQWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIADSSASKEKAQAHIKELEEEVKLLKDLSHPNIVRYLGTVREEDTLNILLEFVPGGSISSLLGKFGAFPEAVIRTFMKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKQYQEVAALFHIGTTKSHPPIPDHLSVGALELLPTASSLTVGDQRFPDQVSRSNHVGHRESINIVSNNDHSAAVCPHESSDALRFSSLTSLTGNVRRFPDGFSGSSDLHCQATGQLGYTCNALLYNSSESE 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1623 285 FunFam Serine/threonine-protein kinase STE11 1 94 - -
Lele26g1623 285 SUPERFAMILY Protein kinase-like (PK-like) 4 168 IPR011009 -
Lele26g1623 285 CDD STKc_MAPKKK 3 193 - -
Lele26g1623 285 SMART serkin_6 4 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1623 285 Gene3D Transferase(Phosphotransferase) domain 1 3 174 - -
Lele26g1623 285 Pfam Protein kinase domain 5 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1623 285 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Lele26g1623 285 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Lele26g1623 285 ProSiteProfiles Protein kinase domain profile. 4 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1623 285 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 2 156 - -
Lele26g1623 285 Coils Coil 37 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1623 Lele-ChrLele26 18922385 18923684 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1623 2 173 MAP Kinase Kinase Kinase AT3G06030 80.233 2.74e-93 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lele26g1623 Pkinase 2.2e-43 CL0016