Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1618 ATGACTGGAAATTTCAACAGGAGAGATGCAACACCACAAGATGATGCTTCTGGTGGCCAATTAACTGACTCAGCTTCTTTGTCTGAGACTAAGTCTAGCTCAAGAGGGAACCTTGTTGAAAGGATAGCTGCTAGAGCTGGATTTAATGCCCCAAGGTTGAATACAGAAAGCATTAGATCAGCGGATCCTATGGTGAATTCGGATACTCGATCTGCTTACTTTACCATACCGCCTGGCCTCAGTCCAACCACGCTATTAGAGTCTCCAGTGTTCCTTTCTAATTCGCTGGCACAACCGTCTCCAACAACTGGAAAGTTTCCATTTATCTCAAATGGCTACTTCCGGGGTTCAGAACTGAACTCTGGTGCTCCTGAAAAGACTAAAGATAACAACTTTGATGACATTTATGTATCATCGTTTGCTTTCAAGACTACAACAACAGATTTGGGCTCTTTCTATAATGGTGCTGCTAGAAAAATGAATCCGACGACGCTGCCAGAACAATATCTTACTGCTGAGGTCTCAGCTCCAGACATGACTGATCCTCCCACTCAAAATGATAGTAGAGCATCAGTTGAGGAACCAGCAGATGAAGAGGGATGTCAAAGAGGAAATGGAGATTCACAGGCTGCTGGTGTTGGGGGCACACCATCTGAAGATGGATATAACTGGCGAAAGTACGGACAGAAACAAGTTAAAGGTAGTGAGTATCCACGAAGTTACTACAAATGTACGCATACAAATTGTACGGTAAAGAAGAAAGTGGAACGATCTCATGAGGGCCACATAACAGAAATCATCTACAAGGGGAATCACAACCATCCAAAACCGCCCACGAATCGTAGATCTGCGATAGGGTCTGTTAACCCTCTCGGTGACATGCAAGCAGACGTATCTGAAAGTACTGAACCACATGGTGGGGGTGATGGTGAACTTGGCTGGGCAAGCACAAAAAGGGGAAATATAGCTAGAAATGGCGATTGGAAGCATGAGAACCTTGAACTGACCTCTTCAGCAGCATCCGTGGGCCCTGAATTCGGCAACCAGTCCACCAATTTGCAGGGTCAGAATGGTACTCAATTCGAATCAGAAGAAGCAGTGGACGCCTCATCTACTTTCTCTAACGATGATGATGATGATAGGGCCACTCATGGAAGTGTATCAGTAGGTTATGATGGAGAAGGAGATGAATCAGAGTCTAAAAGAAGAAAACTGGAATCTTATCCAAATACAGCAGAATTGAGTGGAGCCACTAGAGCTATCCGTGAGCCTAGAGTTGTTGTTCAAACTACCAGCGAAGTTGATATCCTTGACGATGGATATCGTTGGCGCAAATACGGACAAAAAGTTGTCAAAGGAAATCCCAATCCCAGGAGTTACTATAAGTGCACCAATGTAGGTTGCAGAGTAAGGAAGCATGTGGAGAGAGCATCACATGACCTGAAATCTGTGATCACTACATACGAAGGAAAGCACAATCATGATGTTCCTGCAGCTCGCAATAGTAATCAAGGCAATTCTGCAGCTTCTAGTGCTGCTACTGCTCAGGCTTCTTCCGTTATTCATAGTCACAGTGCTGAAGCTTCACAAGTTCATGATAGTATTGGGAGACTTGAGAGGCCTGTTTTGGGCCTGGGCTCATTCAACTTACCTGGAGCTGGGCCTGGGCCTGGCAGGCCACAGCTTGGGCCTTCCCCTGGCTTTTCCTTCGGAATTGGAATGAATCAATCCGGCTTCCCCAACCTAGCCGCCATGGCAGCTTTGGGCCCAGCCCATGCCAAGCTTCCAGTCATGCCTGTTCATCCGTTCTTGCCCAATCAACGTCCACCAAACATGGGCTTCATGTTGCCCAAAGGAGAGCCCAATTTGGAGCCCATTCCAGATCACGGGCTTAATGTGCCTGCTGGTTCATCAGTATACCAAGATATAATGAGTCGGATGCCACTGGGACCTCATATGTAA 1962 0.4633 MTGNFNRRDATPQDDASGGQLTDSASLSETKSSSRGNLVERIAARAGFNAPRLNTESIRSADPMVNSDTRSAYFTIPPGLSPTTLLESPVFLSNSLAQPSPTTGKFPFISNGYFRGSELNSGAPEKTKDNNFDDIYVSSFAFKTTTTDLGSFYNGAARKMNPTTLPEQYLTAEVSAPDMTDPPTQNDSRASVEEPADEEGCQRGNGDSQAAGVGGTPSEDGYNWRKYGQKQVKGSEYPRSYYKCTHTNCTVKKKVERSHEGHITEIIYKGNHNHPKPPTNRRSAIGSVNPLGDMQADVSESTEPHGGGDGELGWASTKRGNIARNGDWKHENLELTSSAASVGPEFGNQSTNLQGQNGTQFESEEAVDASSTFSNDDDDDRATHGSVSVGYDGEGDESESKRRKLESYPNTAELSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNVGCRVRKHVERASHDLKSVITTYEGKHNHDVPAARNSNQGNSAASSAATAQASSVIHSHSAEASQVHDSIGRLERPVLGLGSFNLPGAGPGPGRPQLGPSPGFSFGIGMNQSGFPNLAAMAALGPAHAKLPVMPVHPFLPNQRPPNMGFMLPKGEPNLEPIPDHGLNVPAGSSVYQDIMSRMPLGPHM 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1618 653 MobiDBLite consensus disorder prediction 341 411 - -
Lele26g1618 653 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 86 517 IPR044810 GO:0003700
Lele26g1618 653 Pfam WRKY DNA -binding domain 219 275 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele26g1618 653 Pfam WRKY DNA -binding domain 438 494 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele26g1618 653 MobiDBLite consensus disorder prediction 394 408 - -
Lele26g1618 653 MobiDBLite consensus disorder prediction 1 37 - -
Lele26g1618 653 SUPERFAMILY WRKY DNA-binding domain 429 497 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele26g1618 653 MobiDBLite consensus disorder prediction 267 317 - -
Lele26g1618 653 MobiDBLite consensus disorder prediction 497 530 - -
Lele26g1618 653 MobiDBLite consensus disorder prediction 175 225 - -
Lele26g1618 653 SMART WRKY_cls 218 276 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele26g1618 653 SMART WRKY_cls 437 496 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele26g1618 653 FunFam WRKY transcription factor 33 424 490 - -
Lele26g1618 653 SUPERFAMILY WRKY DNA-binding domain 216 277 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele26g1618 653 Gene3D WRKY domain 211 278 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele26g1618 653 MobiDBLite consensus disorder prediction 341 370 - -
Lele26g1618 653 Gene3D WRKY domain 424 490 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele26g1618 653 ProSiteProfiles WRKY domain profile. 432 497 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele26g1618 653 FunFam WRKY transcription factor 208 278 - -
Lele26g1618 653 ProSiteProfiles WRKY domain profile. 219 277 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele26g1618 653 MobiDBLite consensus disorder prediction 1 38 - -
Lele26g1618 653 MobiDBLite consensus disorder prediction 489 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1618 Lele-ChrLele26 18634026 18637718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1618 35 648 WRKY Transcription Factor Family AT5G56270 51.677 9.48e-175 512
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele26g1618 WRKY 7.8e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1618 26 18634026 18637718 Lele27g0476 27 5970682 5974407 hybridization