Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1563 ATGATCTGGGTTTCCCTTCGCCTGAGTTATCCAGATCTGTTGGTTCAGATCATAAGGAAAGCCAGAGCCACCGCGCCGGTGAAGACGGCGCCGGTGGCGGCGGCGGCGGCGGCTGGGGTTGACGGAGGATCCGGATCGAGGACGGTTTTAAAAGAGCCGAGGTACCGGGGCGTGAGGAAGAGGCCGTGGGGTAGATTTGCTGCGGAGATCAGAGACCCTGTGAAGAAAGCTCGTGTGTGGCTTGGCACCTTCGATTCCGCCGAAGAAGCCGCTAAAGCTTATGACGCCGCCGCTCTCAGCTTCCGTGGACCTAAGGCTAAGACCAACTTTCCGATCAACCCTTCTTCTCTCTCACCTTTCTGTTACCACCACAATAACAACCCCGCCGATCCGTTTTTAGATCACAGGTTGAATGCTTCTAATGGCTTCCAGGAGCACCAGATCAATCCTCAGAGACCTACTTCTAGCGGCATGAGCAGCACCGTCGAGTCCTTCAGTGGTCCCCGCCCTCGGTCGATGGCGCTGCCGTTGACCACCACCACCACCACCTCCCGTAGATACCCTCGGCCTGTCGTGCCAGAGGATTGCCACAGCGACTGCGATTCATCGTCGTCTGTGGTTGATAACGACGGCGATGATATCGCGTCATCCTCCTTCCGGCGGCCTTTCCCCTTCGATCTTAACTTCCCAGCACCGGTCGATGACGATCTTCACTGCACCGATCTGCGTCTCTGA 735 0.5741 MIWVSLRLSYPDLLVQIIRKARATAPVKTAPVAAAAAAGVDGGSGSRTVLKEPRYRGVRKRPWGRFAAEIRDPVKKARVWLGTFDSAEEAAKAYDAAALSFRGPKAKTNFPINPSSLSPFCYHHNNNPADPFLDHRLNASNGFQEHQINPQRPTSSGMSSTVESFSGPRPRSMALPLTTTTTTSRRYPRPVVPEDCHSDCDSSSSVVDNDGDDIASSSFRRPFPFDLNFPAPVDDDLHCTDLRL 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1563 244 Pfam AP2 domain 53 103 IPR001471 GO:0003700|GO:0006355
Lele26g1563 244 PRINTS Ethylene responsive element binding protein signature 77 93 IPR001471 GO:0003700|GO:0006355
Lele26g1563 244 PRINTS Ethylene responsive element binding protein signature 55 66 IPR001471 GO:0003700|GO:0006355
Lele26g1563 244 SUPERFAMILY DNA-binding domain 54 112 IPR016177 GO:0003677
Lele26g1563 244 MobiDBLite consensus disorder prediction 145 187 - -
Lele26g1563 244 CDD AP2 53 113 IPR001471 GO:0003700|GO:0006355
Lele26g1563 244 MobiDBLite consensus disorder prediction 145 213 - -
Lele26g1563 244 ProSiteProfiles AP2/ERF domain profile. 54 111 IPR001471 GO:0003700|GO:0006355
Lele26g1563 244 Gene3D AP2/ERF domain 54 113 IPR036955 GO:0003700|GO:0006355
Lele26g1563 244 SMART rav1_2 54 117 IPR001471 GO:0003700|GO:0006355
Lele26g1563 244 FunFam Ethylene-responsive transcription factor 2 54 113 - -
Lele26g1563 244 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 40 211 - -
Lele26g1563 244 MobiDBLite consensus disorder prediction 198 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1563 Lele-ChrLele26 12307336 12309885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1563 18 244 AP2-EREBP Transcription Factor Family AT3G20310 55.814 2.00e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele26g1563 AP2 2.7e-15 CL0081