LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele26g1546	ATGCTGAATTCGATACCGGATGCTGCGAAGAACTTCGCTCACGAGCACGCACAGGTGATACCTATTTCGCTCTTCGTGGCGGTTCTCTGCTTCTGCTTGCTCATCAGTCACTTGCTCGAAGAAAACCGTTGGGTTAATGAATCCATCGTCGCCATTTTAGTTGGATGCATTGCTGGAATGATACTCTTGTTCATTACCAAGGGGAAGAGTTCTCGCATCCTTACATTCGATGAAGAACTGTTCTTCATATATCTTCTGCCACCCATAATATTCAATGCTGGATTTCAGGTCAAGAAGAAACAGTTCTTCCACAACTTCTTAACTATCATGCTATTTGGGGTGATCGGTGTTTTTATATCAACATCTATTATTGTATCTGGCAGCTGGTGGTTATTTCCCAAGTTAAAATTTATTGGTCTGAGTGTGCAAGATTATCTTGCTATAGGAACAATTTTCTCTTCAACAGATACAGTTTGTACCTTGCAGGTTCTCCATCAAGATGAAACTCCTTTATTATACAGCTTAGTATTTGGAGAAGGAGTGGTAAATGATGCGACATCAGTTGTTCTCTTCAATGCGGTGCAGAAGCTTGATGCTTCGAAAGTTCAAGGTGGGGCACTCCATGTCATTGGAAATTTCTTGTATCTTTTCTCCACAAGCACTGCCCTAGGATTCACTGCTGGACTTATCACAGCATACATCCTGAAAGCCTGCAGCTTTGGAAGACATTCAAGTGTTCGTGAAATTGCATTGATGGTTTTAATGGCATACCTATCCTACATGTTGGCAGAGCTTCTAGAACTCAGTGGAATCCTCACTGTTTTCTTCTGCGGAATATTAATGTCGCACTATGCATGGCATAATGTGACTGAAACTTCAAGAGTCACAACCAGGCATGTCTTTGCGACAATGTCATTTATTGCAGAAACTTTTATATTTCTATATGTGGGTATGGATGCCCTGGACATGGAGAAGTGGAGGATTACCAAATTAAGTTTTGGGAGTTTGATGGGAATTTACAGTTGCTTAATCTTCCTGATATTACTTGGGCGGGCTGCTTTTGTTTTCCCTCTCTCTGCTTTTGCCAATTTTATGAATAGGCGTGCTCATAGAGACTCAAGAATCACATTTAGGCATCAGATAATCATTTGGTGGGCTGGACTTATGAGGGGGGCAGTCTCCATTGCTCTGGCTTTCAAAAAATTCACATATTCTGGAGTTACATCTGATCCTGTTGATGCAACAATGATCACCAACACCATCATTGTTGTGCTTTTCAGCACATTGGTGTTTGGCTTTCTCACAAAACCACTTATCCGTTATCTTCTTCCACATAGCACGACGAGGAAGAACATCAACCGTCAAGAATCTGGTCCTCCTGTTGAGGACTTGAATCTGCCGTTGCTATCCTTTGAGGAGTCAGCAGCAACCAACATCGGTCGTGCAAAGGAAAGTTTGTCCATGTTAATGGAAAGTCCTGTTTACACCATACATCATTACTGGAGGAGGTTTGATGATGCCTACATGAGACCTATATTTGGAGGCCCTCTTGCTTAG	1557	0.4207	MLNSIPDAAKNFAHEHAQVIPISLFVAVLCFCLLISHLLEENRWVNESIVAILVGCIAGMILLFITKGKSSRILTFDEELFFIYLLPPIIFNAGFQVKKKQFFHNFLTIMLFGVIGVFISTSIIVSGSWWLFPKLKFIGLSVQDYLAIGTIFSSTDTVCTLQVLHQDETPLLYSLVFGEGVVNDATSVVLFNAVQKLDASKVQGGALHVIGNFLYLFSTSTALGFTAGLITAYILKACSFGRHSSVREIALMVLMAYLSYMLAELLELSGILTVFFCGILMSHYAWHNVTETSRVTTRHVFATMSFIAETFIFLYVGMDALDMEKWRITKLSFGSLMGIYSCLIFLILLGRAAFVFPLSAFANFMNRRAHRDSRITFRHQIIIWWAGLMRGAVSIALAFKKFTYSGVTSDPVDATMITNTIIVVLFSTLVFGFLTKPLIRYLLPHSTTRKNINRQESGPPVEDLNLPLLSFEESAATNIGRAKESLSMLMESPVYTIHHYWRRFDDAYMRPIFGGPLA	518

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele26g1546	518	PRINTS	Na+/H+ exchanger signature	80	91	IPR004709	GO:0006814\|GO:0006885\|GO:0015385\|GO:0016020\|GO:0055085
	Lele26g1546	518	PRINTS	Na+/H+ exchanger signature	149	159	IPR004709	GO:0006814\|GO:0006885\|GO:0015385\|GO:0016020\|GO:0055085
	Lele26g1546	518	PRINTS	Na+/H+ exchanger signature	94	108	IPR004709	GO:0006814\|GO:0006885\|GO:0015385\|GO:0016020\|GO:0055085
	Lele26g1546	518	PRINTS	Na+/H+ exchanger signature	109	117	IPR004709	GO:0006814\|GO:0006885\|GO:0015385\|GO:0016020\|GO:0055085
	Lele26g1546	518	Gene3D	-	141	193	-	-
	Lele26g1546	518	Pfam	Sodium/hydrogen exchanger family	25	439	IPR006153	GO:0006812\|GO:0015299\|GO:0016020\|GO:0055085
	Lele26g1546	518	PANTHER	SODIUM/HYDROGEN EXCHANGER	14	513	IPR018422	GO:0006812\|GO:0015299\|GO:0016020

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele26g1546	Lele-ChrLele26	11815416	11820395	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele26g1546	10	516	Antiporters	AT5G55470	73.777	0.0	780