Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1544 ATGCCAGATCGAGAAATTTGCAGTTCAATGAAGGAATCTCGTCTTGTTGCGAAGAAATTCTTGGCCAGGCCTCAGCGTGAGGGTGTTGTCGCCGTTGTTAGAAGAAGCGTCGGACGATTTGAGCTCAGGTACTTTGATCCTTTTCTGCTGTTGGATGAATTCTCAGTTTCTGCTCCAGCTGGGTTCCCTGATCATCCACATAGAGGTGTGCAGCAATATAATTTGTCTCTTTCTGTGTCATTTTCGGTTCGAGACAGTCACATATATGTTGCAGGGCACAAAGGAACGATTGAAGCAGGTGACTTGCAGTGGATGACTGCAGGGAAGGGGATAGTTCACTCAGAGATGCCTGCAGCTCATGGAATTCAAAAGGGTCTTCAGCTTTGGATCAATCTTGCTTCCAATGATAAAATGATTGAGCGAAGGTATCAAGAAATGTTAAGCAAGGACATAGCAGAAGTAGAGGAAAGTGGAATTAAAGTAAGGGTTATAGCAGGAGAAGCCTTAGGAAAAAAGTCTCCAATCCAAACAAGGACTCCAACAATATACTTAGATTTCTCTCTCAAACCTGGGGCCCACTTGCAGCAACCTATTCCAAAGTCATGGAATGCTTTTGTCTATGTTTTGGAAGGAGAAGGCGTGTTTGGCAACATGAAATCTCAACCTGTCTCTTCACACCATATTCTTCTTCTTGGTTCTAATGGGGATGGTCTTGAGGTATGGAACAAGTCTTGTAATAATAATAATAAGGTTCTTAGGTTTGTTCTTGTTGGAGGGCAACCATTGGGTGAACCTGTGGCTCAGTTTGGACCATTTGTGATGAACACACAAGAAGAGATTGATCAAGCCATTGATGATTATGAGAATTCTGTAAATGGGTTTGAGAAAGCTAGGCATTGGAAGTCTGAAGCTGCAATTAGTCTTGATTTTTAA 933 0.4244 MPDREICSSMKESRLVAKKFLARPQREGVVAVVRRSVGRFELRYFDPFLLLDEFSVSAPAGFPDHPHRGVQQYNLSLSVSFSVRDSHIYVAGHKGTIEAGDLQWMTAGKGIVHSEMPAAHGIQKGLQLWINLASNDKMIERRYQEMLSKDIAEVEESGIKVRVIAGEALGKKSPIQTRTPTIYLDFSLKPGAHLQQPIPKSWNAFVYVLEGEGVFGNMKSQPVSSHHILLLGSNGDGLEVWNKSCNNNNKVLRFVLVGGQPLGEPVAQFGPFVMNTQEEIDQAIDDYENSVNGFEKARHWKSEAAISLDF 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1544 310 Pfam Pirin 34 130 IPR003829 -
Lele26g1544 310 PIRSF Pirin 12 301 IPR012093 -
Lele26g1544 310 Pfam Pirin C-terminal cupin domain 183 291 IPR008778 -
Lele26g1544 310 CDD cupin_pirin_N 31 132 - -
Lele26g1544 310 PANTHER PIRIN-RELATED 8 304 IPR012093 -
Lele26g1544 310 Gene3D Jelly Rolls 28 288 IPR014710 -
Lele26g1544 310 SUPERFAMILY RmlC-like cupins 14 302 IPR011051 -
Lele26g1544 310 Gene3D Jelly Rolls 152 262 IPR014710 -
Lele26g1544 310 CDD cupin_pirin_C 180 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1544 Lele-ChrLele26 11669813 11673992 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1544 14 298 Calmodulin-binding Proteins AT3G59220 53.147 4.62e-109 317