Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1541 ATGGCAGGGGTATTTGAAGCTGTGACTCGCAAAACTAGAATTTTTGATGTGGTGTACAATGCTTCTAACAATGAGCCGGTTTGTACCCAGACATTGTTCAAGAGTGCTATTGTTCAGGTTGATGCAGCACCTTTCAAGCAATGGTATCTCCAACATTATGGTGTTGACATCGGTCAGAAGAAGAAGACTATAGCTTCTGCCAAGAAGGAAGGGAAAAACAATGGCCGTTTATTGGCTTGCAACTCCTCTCGACCTGGTCAATGTGGTCGTGCTGATGGGTATGTGACATTCACTCCTTTTGCCATTCCATATATCAAATATATTTTGGAGGGAAAAGAACTAGAATTCTACATGAAGAAGCTTCAAAGGAAGAAGGGAAAGGGTGCAGGTGCTGCCTAA 399 0.4286 MAGVFEAVTRKTRIFDVVYNASNNEPVCTQTLFKSAIVQVDAAPFKQWYLQHYGVDIGQKKKTIASAKKEGKNNGRLLACNSSRPGQCGRADGYVTFTPFAIPYIKYILEGKELEFYMKKLQRKKGKGAGAA 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1541 132 Gene3D - 2 97 - -
Lele26g1541 132 Gene3D Ribosomal protein S8e, subdomain 43 129 IPR042563 -
Lele26g1541 132 Pfam Ribosomal protein S8e 6 95 IPR022309 -
Lele26g1541 132 PANTHER 40S RIBOSOMAL PROTEIN S8 73 127 IPR001047 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1541 Lele-ChrLele26 11635207 11637662 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1541 6 132 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 61.438 3.79e-46 147