Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1529 ATGGATGGTGCTAACCACTCCGCTTCGCAGCTTCAGCCTTCGGATTCCGACGATGGGCCATTTAACGATCTGAATCAGCTCGGGTCGCGGCAGAATTCGGACGCCGGAGCATCTGCCTCTGTCAGTGGAGGTGCCCGGTATAAGCTGATGTCGCCGGCTAAGCTTCCGATCTCGAGGTCGCCCTGTATTACGATACCTCCCGGTCTGAGTCCGACATCGTTTCTGGAGTCCCCGGTGCTTCTATCCAACATGAAGGTGGAGCCCTCGCCAACAACAGGGTCTCTCACTAAGCCTCAAGCAGTGTATGGTTCTGTCACTTCTGCAACATTTCCTGTAACGACTATATGCACAAATACCAATACTGTCAATGACCGAAAATCTGGCTTCTTTGAGTTTAAACCATGCTGTAGCACAGATATGGTTCCTGCTGATTTTAACCACCATGTAATAAGTGAGCGGTCCAGGCAAATAGATGGCCCAGGCCATCTTCAATCATATGCCTCATCAACATTAGTTAAAACTGAGACAGCAGTGCCATCAAATAAATTGAGTCTATCTTCGGCTGTTCAAATGGTTAGTTCAGGTACTACTGCACCTTTTGAAGTTGATTCGGATAAACTTAACCAGAAAGGCAATGCCGCCTCTGGGCTTCAAGCATCTTTAGTTGATGGTAGAGGCAATGGCCTTCCAGTTGCAGCTGAGAGAATATCAGATGATGGGTACAATTGGAGAAAATACGGCCAGAAACATGTTAAGGGATGTGAATTTCCACGCAGCTACTACAAATGCACGCATCCAAATTGTGAAGTAAAAAAGTTATTTGAACGCTCTCATGATGGGCAAATAACAGAGATAATTTATAAGGGAAAACATGATCATCCTAAACCTCAAGCAAGCCGTCGATACTCTGCTGGTACTGTGATGCCTATACAAGAAGAGAGAACTGACAAGGCTTCATCAGCCAGCCATGATGACAAATCATCCAATATGCTTGCTCTGGTGCCTCACATAGCTGAACCCAACAGTAACCCAGATCAATCTCCCATACCTGCTGATAGTCCAGAGGGTGTTGGGTTAGGGTCAAATAGGGTTAATGATGAGGTTGATGATGATGATGATCCCTTCTCAAAGAGAAGCAAAATGGACTATGGAAATGCTGACATCACTCCTATAGTTAAGCCAATCCGGGAACCACGGGTGGTTGTACAAACACTAAGTGAGGTTGACATATTGGATGATGGTTACCGCTGGCGTAAGTATGGGCAGAAGGTGGTGAGAGGCAATCCTAACCCTAGATATGGTAAAGTAGTTATAAGTTTAGCTATATCTCATCCAGTTATCTTGTTCCAGCACCAGAGTTATTACAAATGCACGAATGTCGGTTGCCCTGTTAGAAAACACGTGGAGAGGGCATCTCATGATCCCAAAGCGGTAATAACCACCTACGAGGGTAAACACAATCACGACGTGCCTACTGCGAGGAGCACAAGCCATGACACGGCGGGACCAACAGTTGCTGCTGGTGGGCAGACAAGAAATAGACCGGAAGAAAGTGATAATATTAGCCTTGACCTTGGGATGGGCATTAGATCAGCTGCTGAAAATATACCAAACAGACAAGGGCAATTGTTGCTTTCTGAATTCGGGAACGGTCAAACTCACCCCGGCAATTCCAGTCTCAAATTTGTTCATAACACCCCTTCTCCGGCATACTTCAGTGTTCTTAATAATGGCTCAAATACATATGGTTCTAGAGAAAATCTGAGTGATGGTTCATCTTTGAACCATTCCTCGTATCCGTGCCCTCCGAACATGGGAAGAATACTAACTGGTCCGTGA 1839 0.4589 MDGANHSASQLQPSDSDDGPFNDLNQLGSRQNSDAGASASVSGGARYKLMSPAKLPISRSPCITIPPGLSPTSFLESPVLLSNMKVEPSPTTGSLTKPQAVYGSVTSATFPVTTICTNTNTVNDRKSGFFEFKPCCSTDMVPADFNHHVISERSRQIDGPGHLQSYASSTLVKTETAVPSNKLSLSSAVQMVSSGTTAPFEVDSDKLNQKGNAASGLQASLVDGRGNGLPVAAERISDDGYNWRKYGQKHVKGCEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGKHDHPKPQASRRYSAGTVMPIQEERTDKASSASHDDKSSNMLALVPHIAEPNSNPDQSPIPADSPEGVGLGSNRVNDEVDDDDDPFSKRSKMDYGNADITPIVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRYGKVVISLAISHPVILFQHQSYYKCTNVGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARSTSHDTAGPTVAAGGQTRNRPEESDNISLDLGMGIRSAAENIPNRQGQLLLSEFGNGQTHPGNSSLKFVHNTPSPAYFSVLNNGSNTYGSRENLSDGSSLNHSSYPCPPNMGRILTGP 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1529 612 MobiDBLite consensus disorder prediction 585 600 - -
Lele26g1529 612 FunFam WRKY transcription factor 229 297 - -
Lele26g1529 612 MobiDBLite consensus disorder prediction 1 40 - -
Lele26g1529 612 MobiDBLite consensus disorder prediction 487 519 - -
Lele26g1529 612 ProSiteProfiles WRKY domain profile. 406 491 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele26g1529 612 MobiDBLite consensus disorder prediction 287 382 - -
Lele26g1529 612 SUPERFAMILY WRKY DNA-binding domain 235 296 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele26g1529 612 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 144 516 IPR044810 GO:0003700
Lele26g1529 612 Pfam WRKY DNA -binding domain 238 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele26g1529 612 Pfam WRKY DNA -binding domain 452 488 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele26g1529 612 Pfam WRKY DNA -binding domain 412 432 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele26g1529 612 MobiDBLite consensus disorder prediction 494 516 - -
Lele26g1529 612 MobiDBLite consensus disorder prediction 1 39 - -
Lele26g1529 612 SUPERFAMILY WRKY DNA-binding domain 403 491 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele26g1529 612 ProSiteProfiles WRKY domain profile. 232 296 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele26g1529 612 SMART WRKY_cls 411 490 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele26g1529 612 SMART WRKY_cls 237 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele26g1529 612 MobiDBLite consensus disorder prediction 585 612 - -
Lele26g1529 612 Gene3D WRKY domain 396 492 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele26g1529 612 Gene3D WRKY domain 231 297 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1529 Lele-ChrLele26 11507011 11513936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1529 50 612 WRKY Transcription Factor Family AT4G26640 53.684 7.59e-179 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele26g1529 WRKY 4.7e-23 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1529 26 11507011 11513936 Lele27g0582 27 13530786 13536747 hybridization
Lele26g1529 26 11507011 11513936 Lele28g1626 28 16644651 16653938 hybridization