Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1513 ATGTTCTGTGAGATTCTTCAGAGGTACAAGAAGAAGAAGAAGAAGAAGAAGATGGGATTGTCATCAGAAAACAGAGTTTCAGCTTTGCTTTCTTTGGTTATTATAATTTTCTTGGTGGGTTTATCAGCAGCAGAAAGTGGTGAAAATGGTGGTTCTGTGAAAAATTTCATTACTTGGGATGATTTAACGGTGGATGAGAATGGGTTAGCTTCAAGATCTAAGAGTGAAAATGTTCAGGTGATATTGGTTGACCAGAATGGAAATGGAGATTCATCTACAGTTCAAGGTGCTGTGGATATGGTGCCAGATCATAACACACAGAGAGTGAAAATATACATTTCTCCAGGAACTTACAAAGAAAAGGTGTTTGTACCAAGGAACAAGCCATTTGTATCATTCATTGGGAAAAGAAATCAAACACATGGTGTCGTGATTACTTGGAACAGCAAGTCATCAGACATAGGCTCAAATGGTCAAGAATTGGGAACTTCTGGTTCAGCAACTGTAGCAGTAGAATCTGATTACTTCTGTGCAAATAGGATCACTTTTGAGAACTCTGTAGTTGCAGAAGCTGGTGGACATGGAATGCAAGGAGTAGCATTGAGGGTAGATAGTGACAGAGCCATGTTCTATCAAGCTAGATTCTTGGGAACACAAGACACTCTCTTGGATAACACTGGAACTCATTACTTCCTCAAATGTTTCATCCAAGGAAAAGTTGACTTCATCTGCGGCAGTGCAAGATCACTTTATGAGGATTGTCGCCTGAAGTCGACAGCCAATAACTATGGAGCGATCGCTGCTCATCACAGGGATACACCCAATGAAGAAACAGGATTTTCTTTTGTAGGATGTTCAATCCAAGGAACTGGTAAAGTCTACCTTGGGAGAGCATGGGGTGACTATTCAAGAATCATATATTCAAACTGTTATATGGCTGACATTATAATCCCACAAGGCTGGACTGAATGGAATCACCCTTCCAGAAAGAAGACTGCACTTTTTGGAGAGTTTCAGTGCCAAGGAAAAGGAGCAGATAGAAGAAGTAGAGTTCCATGGTCAAAATCTTTCACTTATGATCAAGCAAGGCCTTTTCTTGACAGAAGCTTCATCAATGGAGATCAATGGCTTAGATTGTAG 1140 0.4035 MFCEILQRYKKKKKKKKMGLSSENRVSALLSLVIIIFLVGLSAAESGENGGSVKNFITWDDLTVDENGLASRSKSENVQVILVDQNGNGDSSTVQGAVDMVPDHNTQRVKIYISPGTYKEKVFVPRNKPFVSFIGKRNQTHGVVITWNSKSSDIGSNGQELGTSGSATVAVESDYFCANRITFENSVVAEAGGHGMQGVALRVDSDRAMFYQARFLGTQDTLLDNTGTHYFLKCFIQGKVDFICGSARSLYEDCRLKSTANNYGAIAAHHRDTPNEETGFSFVGCSIQGTGKVYLGRAWGDYSRIIYSNCYMADIIIPQGWTEWNHPSRKKTALFGEFQCQGKGADRRSRVPWSKSFTYDQARPFLDRSFINGDQWLRL 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1513 379 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 70 378 - -
Lele26g1513 379 FunFam Pectinesterase 76 379 - -
Lele26g1513 379 Gene3D - 78 379 IPR012334 -
Lele26g1513 379 SUPERFAMILY Pectin lyase-like 80 377 IPR011050 -
Lele26g1513 379 Pfam Pectinesterase 81 374 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1513 Lele-ChrLele26 11049786 11051780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1513 29 331 Carbohydrate Esterase AT5G55590 55.590 2.74e-130 375