Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1502 ATGGCGGACTCGGATAACGATTCCGAAAGTGCTCCGAACGTGGGGAACAATGCGAACAGCAGCGAACTCTCGCTGCCAGAGCAAGACCGGTTTCTACCAATCGCGAATGTGAGCAGGATCATGAAGAAGGCTCTTCCAGCTAATGCGAAGATCTCGAAGGACGCTAAGGAGACAGTACAAGAGTGCGTATCGGAGTTCATCAGCTTCATCACCGGCGAGGCCTCAGACAAGTGCCAGAGAGAGAAACGGAAGACCATCAATGGCGACGATTTGCTTTGGGCTATGACGACGTTAGGATTTGAAGACTACGTGGAGCCGCTCAAGATATACCTCCAGAGGTTCCGGGAAATGGAAGGCGAGAAGAGCGTGGTGGCGCGTGACAAGGACGGTGGTGTCGGAGGCATGAACGCTGCCAATAGTGGCTACGAGGGCGGAGGACGAGGAGGAGGTGGTGGTGGAGTGTATGGGGGAGTAGGGATGATGATGCATCAGGGACACGTGTACGGATCTGGAGGGTTTCATCCAATGGCTGTAAGTGGAGGAAGTGGTGGTCCTGTGATGGGGAAGAGTGGGCCCAGTTATCCTAGTGCCGGATCTAATACAGGTAGGCCCAGATAG 618 0.5453 MADSDNDSESAPNVGNNANSSELSLPEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKIYLQRFREMEGEKSVVARDKDGGVGGMNAANSGYEGGGRGGGGGGVYGGVGMMMHQGHVYGSGGFHPMAVSGGSGGPVMGKSGPSYPSAGSNTGRPR 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1502 205 ProSitePatterns NF-YB/HAP3 subunit signature. 62 78 IPR003956 GO:0005634|GO:0006355|GO:0043565
Lele26g1502 205 Gene3D Histone, subunit A 19 139 IPR009072 GO:0046982
Lele26g1502 205 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 6 127 IPR027113 GO:0001228|GO:0006355|GO:0016602
Lele26g1502 205 MobiDBLite consensus disorder prediction 180 205 - -
Lele26g1502 205 PRINTS CCAAT-binding transcription factor subunit A signature 97 115 - -
Lele26g1502 205 PRINTS CCAAT-binding transcription factor subunit A signature 59 77 - -
Lele26g1502 205 PRINTS CCAAT-binding transcription factor subunit A signature 78 96 - -
Lele26g1502 205 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 31 95 IPR003958 -
Lele26g1502 205 MobiDBLite consensus disorder prediction 1 25 - -
Lele26g1502 205 SUPERFAMILY Histone-fold 28 129 IPR009072 GO:0046982
Lele26g1502 205 FunFam Nuclear transcription factor Y subunit B-3 20 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1502 Lele-ChrLele26 10929269 10929886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1502 1 125 CCAAT-HAP3 Transcription Factor Family AT4G14540 81.600 1.61e-70 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Lele26g1502 CBFD_NFYB_HMF 2e-27 CL0012