Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1501 ATGGGAAGCTTCACGGAGATGCAGATGCAGGAGGAATTCATCTTCCGAAGCCCTCATTACGGGGTTGTCACGGTTCCAGATAACGTGACATTGCCGGAGTTTGTGCTTCACAACTCGGAGTTGTACGCCGACAAGGTGGCGTTCGTGGAGGTTGGGAGCGGGAAGGCAATAACACACGGCCAAGTGGCGAGGGACACAGAGAGGTTTGCGAAGGCGTTGAGATCTTTGGGTGTGAGGAAAGGGCATGTCGTGATTGCTGTGCTTCCTAATGTTCCTGAGTATGCGATTGTTGCGTTGGGGATTATGTCGGCCGGCGCGGTGTTTTCAGGCGCCAATCCGGCAGCTCATGGTTCGGAAATCAAGAAGCAGGCTGAGTCTGCTGATGCCAAGCTAATTATAACAAATGGACTCAACTATGAAAGATTTAATTTCCTCGTGAAAGGCGTAGGCTTACCGGTGATAGTGCTCGACGACGAGCCCATCGAAGAAGCCATGAACTGGAAGAAGCTTCTAGAAGCAGCAGACCGAGCCGGCCAGACCCATCCCAAAGAACCAATCTCTCAGACCGATCTCTGTGCCCTGCCTTTCTCCTCAGGAACCACCGGACTCTCAAAGGGCGTCATGTTAACTCACAGAAACCTCGTCGCCAACCTCTGCTCCACCCTCTTCGGAGTCGAACCGGAGATGATTGGTCAGGTCACAACTCTAGGGTTGCTCCCTTTCTTCCATATCTACGGCATCGCCGGAATCTGCTGCGCCACGCTCAGGAACAAAGGCACGGTGGTGGTCATGGGACGGTTCGAGCTGAGGACTTTTTTGAATGCTTTGATCGCTCATGAGGTCAATTTCGCTCCCATCGTCCCTCCCATTATTCTGAACTTGGTTAAGAACCCTGTCGTGGATGAGTTCGATCTCTCCAAGCTCAAGCTTCAGGCCGTCCTTACCGCCGCCGCTCCTCTTGCTCCGGAAGTTCTCACGGCGTTTGAGAATAAGTTCCCCGGTGTACTTGTCCAACAAGCGTATGGACTAACAGAACATAGCTGCATCACACTGACACATGCACACAAGGGATTATCTAATTCGAAAAGGAACTCAGTGGGCTTCATCCTCCCTAATATGGAAGTGAAGTTCATTGATCCTGACACAGGCAAGTCCCTGGCGAGGAACATGTCCGGAGAGCTCTGTGTGAGAAGCCAGGCCGTCATGCAAGGTTACTACAAGCAGGTGGAAGAGACTGCACAGACAATTGATAAGGATGGGTGGCTTCACACCGGAGACATAGGCTTCATTGATGACGATGACGATGTCTTCATTGTGGATCGTATCAAGGAGTTGATTAAATACAAAGGCTTCCAAGTTGCTCCGGCAGAGCTAGAGGCAATTCTTTTATCTCATCCCTCCATTGAAGATGCTGCCGTCGTCCCAATAGCAGATGAAGAAGCAGGAGAGATCCCAGGTGGGAGCGTGGTGATGAGCGCAGGAGCTAAAGAGAGTGAAGAAGACATAATCAAGTACGTTGCTTGTAATGTTGCAAGTTACAAGAAAGTGAGAGTTCTTCACTTTGTGGATGCCATCCCTAAATCTCCTTCTGGAAAAATCATGAGGAGGCTTGTCAGAGACCGAATGCTCCAAAACATGCCTTCTTCTACTCAGTCAAATAACTCTGCCTAA 1671 0.5045 MGSFTEMQMQEEFIFRSPHYGVVTVPDNVTLPEFVLHNSELYADKVAFVEVGSGKAITHGQVARDTERFAKALRSLGVRKGHVVIAVLPNVPEYAIVALGIMSAGAVFSGANPAAHGSEIKKQAESADAKLIITNGLNYERFNFLVKGVGLPVIVLDDEPIEEAMNWKKLLEAADRAGQTHPKEPISQTDLCALPFSSGTTGLSKGVMLTHRNLVANLCSTLFGVEPEMIGQVTTLGLLPFFHIYGIAGICCATLRNKGTVVVMGRFELRTFLNALIAHEVNFAPIVPPIILNLVKNPVVDEFDLSKLKLQAVLTAAAPLAPEVLTAFENKFPGVLVQQAYGLTEHSCITLTHAHKGLSNSKRNSVGFILPNMEVKFIDPDTGKSLARNMSGELCVRSQAVMQGYYKQVEETAQTIDKDGWLHTGDIGFIDDDDDVFIVDRIKELIKYKGFQVAPAELEAILLSHPSIEDAAVVPIADEEAGEIPGGSVVMSAGAKESEEDIIKYVACNVASYKKVRVLHFVDAIPKSPSGKIMRRLVRDRMLQNMPSSTQSNNSA 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1501 556 Pfam AMP-binding enzyme C-terminal domain 457 532 IPR025110 -
Lele26g1501 556 Gene3D - 444 546 IPR045851 -
Lele26g1501 556 FunFam 4-coumarate--CoA ligase 2 444 545 - -
Lele26g1501 556 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 11 540 - -
Lele26g1501 556 SUPERFAMILY Acetyl-CoA synthetase-like 12 544 - -
Lele26g1501 556 Gene3D - 13 443 IPR042099 -
Lele26g1501 556 Pfam AMP-binding enzyme 39 448 IPR000873 -
Lele26g1501 556 CDD 4CL 25 536 - -
Lele26g1501 556 ProSitePatterns Putative AMP-binding domain signature. 194 205 IPR020845 -
Lele26g1501 556 FunFam Long-chain-fatty-acid--CoA ligase FadD 19 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1501 Lele-ChrLele26 10913960 10918742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1501 6 543 Monolignol Biosynthesis Gene Families AT1G62940 72.509 0.0 768