Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1488 ATGCCTATAGCTAATATAAACCTAACACCACACGTCTACCCTTTTGAGTATGTGGGTTCATTTGCAGATTCCTTTACCAAAATCAAAATGATCCCCTTCATTATTACTATCAATTTTCTGCTATGCATAGCTTCTCAGATTCTGTTGCCAACTAGAGCTGCCATGGCCACTGGGTCGGAGACTGATAGGCTTGCATTGCTTGCTTTGAAGGATACGCTGACCAAAGGCAATTCAGAAGCTCTGCCTTCATGGAATGAATCTGTCCACTTCTGCAAGTGGCAAGGTGTTACATGCAATCTCCGTCATATGAGAGTCTCAGCTTTGAACTTGACATATCAAAATTTGGGGGGCACTCTTGCACCAGCATTAGAGTTATATTTTCCTTTCAACCACTTGTGTGGAACTATTCCATCAAATATTGGCCTTGCTTTCCCAAATCTTCAGCAGTTTAACGCGGGACAGAACATGTTGACAGGAACTATTCCAGCTTCATTATCCAACATCTCTCAATTGCAATTATTTTCAATATATGAAAATGCTTTTAGGGGCCTAATCCCTACCTCTTTGGGAAGACTACAGAACCTTCGTATATTTGTAATTGACACAAATAATTTTGGAACTGAAGAAGGTCATCATGACTTGGATTTCCTTTCATCATTAACAAATTGTAGTCAACTGAAAACGTTAGAGATGTCAAATAATAAATTTAGTGGGGTATTGCCAAAGTCAATTGGAAATCTCTCTTCCCAACTTTATTGGCTTAATGTGAAATTAAATCATATCTTTGGACGCATACCTAATGAGATGGGGCAACTAGATGGATTAGCTGTCCTTAATTTGGGACATAATTTCCTTCAAGGCACAATTCCGCGTTCAATTGGAAAGCTTGAAAATCTTGGAAAGCTATTCCTAGAAGGAAATAAATTATCTGGTAGAATTCCTGATATCTTCGGAAATCTTACAAAATTATTTCAACTTTGGTTGTTTGATAATAATTTTGAGGGAACCATTCCAGTAAGCCTCCAACATTGCAAAGGTTTGCAATTATTGTACATAGATCACTATAACTTGATCGGTTATATACCAAAGCTAACTTTTAGTCATCTAGAAAGCATGATACATCTGGACATGTCTTCCAATTCCTTGATTGGTCCCATTCCATCTGAGATCGGTAACATGAAGCATTTAGTGCAATTAAATCTCAGCACAATCCCCCAAGAACTAAAACATTTTCCAATATTGGAGACTTTGAACCTATCTTACAACCATTTTCATGGTGAGGTTCCGAAAGACTTTGGATTAGCTAGGCTTCTTCATGAGGTTACAAGCTATTCTGGTGAGGGTCACACTACATCATCAATTAAAGGAACAATTGGGTATATTCCTCCAGAGTATGGAGAAAGTGGCCAAGTTACAACACAAGGGGATATCTACAGCTACGGGGTTCTTATGCTTGAGATGCTCACTGGAAAGAAGCCAACAGATAGCATGTTTCATGAGGATCTAAGTCTGCCCAAATTTTGCAAGCTAGCATTACCAGATGGAGTCCTTGAGATAATGGATTCAAAATTGCTTGTTCTATCTGATAGAGACCACATGAAAGTTAAGCAGAATTCAAATATGGAACGTGAAATTCAAGAGTCCCTAGCTAACTTTGCTAGGATTGGAGTGGCATGTTGCGCAGAATTACCTAGTGAACGAATGGACATAAAAGTTGTTTTAGCAGAGTTGCTTGCAATTAAGCATAAGCTCTCCACTTTCAACATTGTCATATGA 1776 0.3846 MPIANINLTPHVYPFEYVGSFADSFTKIKMIPFIITINFLLCIASQILLPTRAAMATGSETDRLALLALKDTLTKGNSEALPSWNESVHFCKWQGVTCNLRHMRVSALNLTYQNLGGTLAPALELYFPFNHLCGTIPSNIGLAFPNLQQFNAGQNMLTGTIPASLSNISQLQLFSIYENAFRGLIPTSLGRLQNLRIFVIDTNNFGTEEGHHDLDFLSSLTNCSQLKTLEMSNNKFSGVLPKSIGNLSSQLYWLNVKLNHIFGRIPNEMGQLDGLAVLNLGHNFLQGTIPRSIGKLENLGKLFLEGNKLSGRIPDIFGNLTKLFQLWLFDNNFEGTIPVSLQHCKGLQLLYIDHYNLIGYIPKLTFSHLESMIHLDMSSNSLIGPIPSEIGNMKHLVQLNLSTIPQELKHFPILETLNLSYNHFHGEVPKDFGLARLLHEVTSYSGEGHTTSSIKGTIGYIPPEYGESGQVTTQGDIYSYGVLMLEMLTGKKPTDSMFHEDLSLPKFCKLALPDGVLEIMDSKLLVLSDRDHMKVKQNSNMEREIQESLANFARIGVACCAELPSERMDIKVVLAELLAIKHKLSTFNIVI 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1488 591 SUPERFAMILY Protein kinase-like (PK-like) 431 575 IPR011009 -
Lele26g1488 591 SUPERFAMILY RNI-like 125 433 - -
Lele26g1488 591 SMART serkin_6 355 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1488 591 Gene3D Ribonuclease Inhibitor 216 432 IPR032675 -
Lele26g1488 591 Gene3D Transferase(Phosphotransferase) domain 1 433 587 - -
Lele26g1488 591 FunFam Nuclear pore complex protein NUP107 59 207 - -
Lele26g1488 591 Pfam Leucine rich repeat 250 309 IPR001611 GO:0005515
Lele26g1488 591 Pfam Protein kinase domain 431 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1488 591 Pfam Leucine rich repeat N-terminal domain 60 99 IPR013210 -
Lele26g1488 591 Gene3D Ribonuclease Inhibitor 122 209 IPR032675 -
Lele26g1488 591 PANTHER OS01G0149700 PROTEIN 47 315 - -
Lele26g1488 591 Gene3D Ribonuclease Inhibitor 54 121 IPR032675 -
Lele26g1488 591 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 208 445 - -
Lele26g1488 591 ProSiteProfiles Protein kinase domain profile. 194 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1488 591 Pfam Leucine Rich Repeat 225 247 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1488 Lele-ChrLele26 10732963 10736332 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1488 113 584 Receptor kinase-like Gene Family AT3G47090 27.379 4.97e-29 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele26g1488 Pkinase 2.6e-10 CL0016