Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1486 ATGATCCCCTGCATTATTACCACCAGTTTTCTGCTATGCATAGCTTCTCAAATTATATTGCCAATTACTGCTGCCATGGCCACTGGTTCAGAGACTGATAGGCTCTCTTTGCTTGCTCTGAAGGATAAGTTAACGAATGGTGTTCCAGAAGCTTTGCCTTCATGGAATGATTCTATCCATTTCTGCAAGTGGCAAGGTGTTACATGCAACCTTCGTCACATGAGAGTCTCAGCTTTGAACTTGACAAATCAAAATTTGGGGGGCATTATTGCACCAGCATTAGGTAACTTAACCTTTCTCAAACTTCTCAATCTTTCGTATAATGGATTGCATGGTCATATTCCGAAACAAATTGGTCGTCTTAAACGGTTGCAAATTCTCCATTTGAATCAAAATAATCTCCAAGGAGAGATCCCTATAGAGCTGGCCAACTGTTCTAAACTCCAGAAGATTTTCTTTACTTCCAATAATTTGACCGGCAAAATTCCTTTTTGGTTAGGATCTATGCGACAACTTACAGTGTTGGCAATTGGTACAAATGAATTTCATGGAAATATTCCGCCATCGTTGGCAAATCTTTCATCTTTGGAGCGTTTGTCTCTTTCGTATAATAATTTGGAAGGAAGTATACCTCAATCTCTAGGTAGGTTGTCGAATTTGTACGTGCTCTATCTTGGTGACAACAATCTTTCTGGAATAATCCCTTCTTCACTTTATAATCTTTCTCGCATGGACGATTTAGATTTTCCTTCCAACTATTTGTCTGGAACTATTCCATCAAATATTGGCCTTGCTTTCCCAAATCTTCGATATTTGAATTTGGGACACAACATGTTGACGGGAACTATTCCAACTTCATTATCCAACATGTCTCAATTGCAATTGTTTGCAATATATGAAAATTCTTTTAGGGGCCTAGTCCCTATCTCTTTTGGAAGACTACAGGACCTTCGTGTATTTGATATTGACACAAATAATTTTGGAAGTGAAGAAGGTCATGATCGGGATTTCCTCTCATCATTAACAAATTGTAGTCAATTGAATACAATAGATATGTCAAGGAATAAATTTAGCGGTGTACTGCCAAATTCAATTGGGAATTTCTCTTCCCAACTTGATAAACTTATTATGCGATTCAATCATATCTCTGGAAGCATACCTAATGAGATCGGGCAACTAGATGGATTAACTTCCCTTGGTTTGGAGTATAACTTCCTTCGAGGCACAATTCCACATTCAATTGGAGAGCTTGAAAATATTGGAAGGATATACCTAGATCACAATCAATTATCTGGTACAATTCCTGATATCTTTGGAAATCTTACTAACTTGATTGAGCTTTCGTTGTCTGATAATAATTTTGAGGGAACCATTCCAGTACTCAAGCATTGCAAAGGTATGGAATTCTTGTACATACATCAAAATAACTTGAGTGGTAATATACCAAATCTTACTTTCGGTAATCTAGAAAGCTTAGTACATCTTTTCTTGTCTTCCAATTCCTTGATTGGTCCCATTCCATCAGATATTGGTAACATGAAGCATTTAGTGGAATTAAATCTCAGTAATAACAATTTTTCTGGTGATATTCCAACGGAACTTGGGGAATGCTTACAGTTGACAGATCTTGATATGAGCAGGAACTTCCTGCATGGAAGTATCCCCTCATCCTTTAGTTCCTTAAAATCTCTCATCAACTTAGACCTTTCCCGCAATAACTTGTCAGGCCCAATCCCCCAAGAACTAAAATATTTTCCAATATTGGAGACTTTGAACCTATCTCACAACCATTTTTATGGTGAGGTTCCAAAAGGAGGAGTGTTCGATAATATCACAGCTATTTCACTCACAGGAAATGACGATCTTTGCGGTGGAATACCGCAACTAAAGCTTCCCGAATGCCCAAGAAAGTCGAAGAAGCAATCCAAAGTCATTATCCTTATCATCATGATAAGTGGTGGTCTTACTTGTTTTGCAATTTGCCTAATCATTTTCAAGAGAAGGAAACACAAACAGTCGTCTTCCTCCCCATCTTCTCCAGAGAATACTCATTTGAGGGTTTCTTATAAACAGCTACATGACGCAACCAATGGATTTTCTTCATCCCATTTGGTTGGTGTAGGAACCTTTGGTTCTGTATACAAAGGAACTCTTCAACATTTTGAAACACCTATTGTTGTAAAGGTGCTAAATCTTCAAGCGCATGGGGCAACAAGGAGTTTCATCACAGAATGCAAAACTCTCAGTAAAGTCCGGCATAGGAATCTGTTGAAGATATTGACTTCATGTTCAAGCATTGATTACAAAGGCAATGATTTTAAGGCCCTTGTTTTTGAGTTCATGCCTAACGGGAGCTTGGATGATTGGTTGTCAGCGAACGAACTTGGTGAAACTAGAAATTTGTATTTGAATTTCAGACAAAGATTGGATGTAGCTATTGATGTGGCTCATGCTTTGGATTATCTTCATCATGATTTTGATGAAACTATTGTTCATTGTGACATCAAGCCAAGTAATGTTCTTCTTAGTGATGATATGGTCGCGCACTTGGGAGACTTTGGATTAGCTAGGCTTCTTCATGAGGTTACAAGCTATTCTGGTGAGGGTCACACTACATCATCATCAATTAAAGGAACAATTGGGTATATTCCTCCAGAGTATGGAGAAAGTGGTCAAGTTACAACACAAGGGGATATTTACAGCTATGGGGTTCTTATGCTAGAGATGCTCACTGGAAAGAAGCCGACAGATAGCATGTTTCATGATGATCTAAACCTACCCAAGTTCTGCAAGTTAGCATTCCCAGACAGAGTCCTTGACATAGTGGATTCAAATTTGTTTATTCTGTCTGACAGAGACCACAGGAAAGTTATGCAGAATTCGAATATGGAACAGAAAATTCAAGAGTGCTTTACTTGCTTTACTAGGATTGGAGTGGCATGTTGTGCAGAATTACCTAGTGAAAGAATTGGCATAAAAGATGTTATAGCGGAGTTGCTCACGATTAAGCAGCAACTATCAACTTTCAACATTGTCATATGA 3042 0.3823 MIPCIITTSFLLCIASQIILPITAAMATGSETDRLSLLALKDKLTNGVPEALPSWNDSIHFCKWQGVTCNLRHMRVSALNLTNQNLGGIIAPALGNLTFLKLLNLSYNGLHGHIPKQIGRLKRLQILHLNQNNLQGEIPIELANCSKLQKIFFTSNNLTGKIPFWLGSMRQLTVLAIGTNEFHGNIPPSLANLSSLERLSLSYNNLEGSIPQSLGRLSNLYVLYLGDNNLSGIIPSSLYNLSRMDDLDFPSNYLSGTIPSNIGLAFPNLRYLNLGHNMLTGTIPTSLSNMSQLQLFAIYENSFRGLVPISFGRLQDLRVFDIDTNNFGSEEGHDRDFLSSLTNCSQLNTIDMSRNKFSGVLPNSIGNFSSQLDKLIMRFNHISGSIPNEIGQLDGLTSLGLEYNFLRGTIPHSIGELENIGRIYLDHNQLSGTIPDIFGNLTNLIELSLSDNNFEGTIPVLKHCKGMEFLYIHQNNLSGNIPNLTFGNLESLVHLFLSSNSLIGPIPSDIGNMKHLVELNLSNNNFSGDIPTELGECLQLTDLDMSRNFLHGSIPSSFSSLKSLINLDLSRNNLSGPIPQELKYFPILETLNLSHNHFYGEVPKGGVFDNITAISLTGNDDLCGGIPQLKLPECPRKSKKQSKVIILIIMISGGLTCFAICLIIFKRRKHKQSSSSPSSPENTHLRVSYKQLHDATNGFSSSHLVGVGTFGSVYKGTLQHFETPIVVKVLNLQAHGATRSFITECKTLSKVRHRNLLKILTSCSSIDYKGNDFKALVFEFMPNGSLDDWLSANELGETRNLYLNFRQRLDVAIDVAHALDYLHHDFDETIVHCDIKPSNVLLSDDMVAHLGDFGLARLLHEVTSYSGEGHTTSSSIKGTIGYIPPEYGESGQVTTQGDIYSYGVLMLEMLTGKKPTDSMFHDDLNLPKFCKLAFPDRVLDIVDSNLFILSDRDHRKVMQNSNMEQKIQECFTCFTRIGVACCAELPSERIGIKDVIAELLTIKQQLSTFNIVI 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1486 1013 SUPERFAMILY Protein kinase-like (PK-like) 672 1000 IPR011009 -
Lele26g1486 1013 SUPERFAMILY RNI-like 246 604 - -
Lele26g1486 1013 FunFam LRR receptor-like serine/threonine-protein kinase EFR 334 640 - -
Lele26g1486 1013 FunFam LRR receptor-like serine/threonine-protein kinase EFR 669 780 - -
Lele26g1486 1013 SUPERFAMILY L domain-like 30 327 - -
Lele26g1486 1013 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 339 1000 - -
Lele26g1486 1013 ProSiteProfiles Protein kinase domain profile. 699 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1486 1013 Pfam Leucine rich repeat 267 327 IPR001611 GO:0005515
Lele26g1486 1013 Pfam Leucine rich repeat 539 598 IPR001611 GO:0005515
Lele26g1486 1013 Pfam Leucine rich repeat 195 254 IPR001611 GO:0005515
Lele26g1486 1013 Gene3D Ribonuclease Inhibitor 333 643 IPR032675 -
Lele26g1486 1013 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Lele26g1486 1013 Pfam Protein kinase domain 701 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1486 1013 Gene3D Ribonuclease Inhibitor 187 332 IPR032675 -
Lele26g1486 1013 SMART serkin_6 699 1000 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1486 1013 Gene3D Transferase(Phosphotransferase) domain 1 781 1010 - -
Lele26g1486 1013 ProSitePatterns Protein kinases ATP-binding region signature. 705 728 IPR017441 GO:0005524
Lele26g1486 1013 ProSitePatterns Serine/Threonine protein kinases active-site signature. 830 842 IPR008271 GO:0004672|GO:0006468
Lele26g1486 1013 Gene3D Ribonuclease Inhibitor 30 186 IPR032675 -
Lele26g1486 1013 Gene3D Phosphorylase Kinase; domain 1 661 780 - -
Lele26g1486 1013 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 69 333 - -
Lele26g1486 1013 SMART LRR_typ_2 417 440 IPR003591 -
Lele26g1486 1013 SMART LRR_typ_2 193 216 IPR003591 -
Lele26g1486 1013 SMART LRR_typ_2 266 290 IPR003591 -
Lele26g1486 1013 SMART LRR_typ_2 217 240 IPR003591 -
Lele26g1486 1013 SMART LRR_typ_2 441 463 IPR003591 -
Lele26g1486 1013 SMART LRR_typ_2 513 537 IPR003591 -
Lele26g1486 1013 SMART LRR_typ_2 585 610 IPR003591 -
Lele26g1486 1013 SMART LRR_typ_2 489 512 IPR003591 -
Lele26g1486 1013 SMART LRR_typ_2 97 121 IPR003591 -
Lele26g1486 1013 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 781 1010 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1486 Lele-ChrLele26 10716488 10719747 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1486 31 1006 Receptor kinase-like Gene Family AT3G47570 43.347 0.0 792
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele26g1486 Pkinase 9.5e-40 CL0016