Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1474 ATGAGGATTTGGATTTCTTGTTATGATATTGGCTGTCTGCTCAATCTTCTGCTGCTTTATGGCCGTTATCGTCAGCTTTATTTGTCTCATGGAGATGCTCTTAGCCTCTCTGATATGGAACAACAGAGAGGCAATGAAGAAACCAGGTGTTCACATTTGATGAACAAATGCCGGAGTTCGCTGGAGCTTTTCTTCGCCATATGGTTTGTGATGGGAAATGTTTGGGTTTTTGACTCACGTTTTGGGTCATTCCAAAGAGCTCCAAAACTGCACGTGCTCTGCATCTCCTTGCTTGCTTGGAATGCCATAACCTACTCTTTCCCTTTCCTTCTCTTCCTCCTGCTCTGCTGCTGTGTGCCTCTGATCAGCAGCCTCCTCGGTTACAACATGAACATGGCATCTTCTGATAAGGGAGCTTCTGATGATCAAATCTCTCAGCTTCCAAGTTGGAGATACAAGCAAGTTCATCATAACAAGTTGGACAATAATGGCCTTGATTCTGCAGCCAGTGAAGGGCTGATCAATGAAGATCCTGAATGTTGCATTTGCTTAACCAAATACAAAGACAGAGAAGAAGTGAGGCAATTGCTATGTTCTCATATGTTTCACCAAAAATGTGTGGATCAATGGCTGAGAATCATATCTTGTTGCCCTCTATGTAAACAAGGATTACAGAGATAG 681 0.4302 MRIWISCYDIGCLLNLLLLYGRYRQLYLSHGDALSLSDMEQQRGNEETRCSHLMNKCRSSLELFFAIWFVMGNVWVFDSRFGSFQRAPKLHVLCISLLAWNAITYSFPFLLFLLLCCCVPLISSLLGYNMNMASSDKGASDDQISQLPSWRYKQVHHNKLDNNGLDSAASEGLINEDPECCICLTKYKDREEVRQLLCSHMFHQKCVDQWLRIISCCPLCKQGLQR 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1474 226 SUPERFAMILY RING/U-box 170 224 - -
Lele26g1474 226 Pfam Ring finger domain 179 221 IPR001841 -
Lele26g1474 226 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 1 224 - -
Lele26g1474 226 SMART ring_2 180 220 IPR001841 -
Lele26g1474 226 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 127 225 IPR013083 -
Lele26g1474 226 ProSiteProfiles Zinc finger RING-type profile. 180 221 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1474 Lele-ChrLele26 10497148 10499769 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1474 1 224 C3H Transcription Factor Family AT4G26580 72.124 9.67e-108 311