Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1451 ATGTCTCAAGCCCTCAATTTCCCTCTCCCCGCCGGCCGGCCACTCAGTTCTTCCTCATCCTCGGCCTCATCCCTCAGATTTCTCCGGCGTCTACCTGTAAAGTCCTCAAAGGAGTGCAGAGCTTCGATCGGCGCTGTCGCTACGGAGGCCGATCCGGCAGTGATGGATTCTCGGCGGCCATTGAGTCTCTATGAGGTGCTCCGAGTGAACCAGAATGCGTCTCCGACGGAAATCAAGTCAGCGTATAGGAATTTGGCCAAGCTGTACCATCCTGATTCGGCCGTGCGCCAATCAGAATCGGACGCAAGGGACTTCATCGCGATCCACAACGCCTATGAGACGCTCTCCGATCCGTCGGCTAGAGCACAGTATGATCTCTCGTTGACGGCTTCTCGCCGGAGGAGGCGTCCGTATCTGTCGTCGATGCAAGATCGCTCTTCCGGATTCTATACGACCCGAAATTGGGAGACGGATCAATGCTGGTAG 486 0.5638 MSQALNFPLPAGRPLSSSSSSASSLRFLRRLPVKSSKECRASIGAVATEADPAVMDSRRPLSLYEVLRVNQNASPTEIKSAYRNLAKLYHPDSAVRQSESDARDFIAIHNAYETLSDPSARAQYDLSLTASRRRRRPYLSSMQDRSSGFYTTRNWETDQCW 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1451 161 CDD DnaJ 64 117 IPR001623 -
Lele26g1451 161 SUPERFAMILY Chaperone J-domain 60 128 IPR036869 -
Lele26g1451 161 Gene3D DnaJ domain 55 148 IPR036869 -
Lele26g1451 161 PRINTS DnaJ domain signature 64 82 IPR001623 -
Lele26g1451 161 PRINTS DnaJ domain signature 82 97 IPR001623 -
Lele26g1451 161 PRINTS DnaJ domain signature 100 120 IPR001623 -
Lele26g1451 161 ProSiteProfiles dnaJ domain profile. 62 128 IPR001623 -
Lele26g1451 161 Pfam DnaJ domain 63 125 IPR001623 -
Lele26g1451 161 ProSitePatterns Nt-dnaJ domain signature. 105 124 IPR018253 -
Lele26g1451 161 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 1 161 - -
Lele26g1451 161 MobiDBLite consensus disorder prediction 1 25 - -
Lele26g1451 161 SMART dnaj_3 61 120 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1451 Lele-ChrLele26 10257781 10258266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1451 64 125 C2H2 Transcription Factor Family AT1G74250 46.970 6.96e-09 52.0