Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1437 ATGCTATTGAGAAAAATGTGGGATTCGGTATTGAATCGTTCGAGTTCGGGTTCAAATTCCAACTCGCCGGAACGCTTTCGTTGCGTGGATTCGCCTCTGGGTGTGTTCGAGCAATTTCCTGCCGATATAGTGATCCAAATCCTGAGGCTTCTGGATCCCAAAGAAGCTGCGAAATTGAGTCTTGTGTGCAAAGCATGGAGATCGCTGGCCTCCGATAATCGGCTATGGATTTATTTCCTTCAGAATTACCAATTGGAGCCATGGGAGACCATTTTTTTCGCCGAGACCAATTTGAGGTCCGGTCATCCTCTTCCAACCTTGGTCGGTCAGATGCATCAGTTATCTTTCAAGCGTATATATGGCCTACGAGAACAAGTTCCTGGTGCTGTTATCATCGATGGTGGTTCTGGCTATTGCAAGTATGGTTGGAGCAAATATGACCGCCCATCAGGGCGATCGGCTACCTTTTTGGAATTCGGTAACCTTGAGACTCCAATGTACACTAGACTTAGACATTTTTTTGCAACTATTTATAGCAGGATGCAGGTTAAACCATGTACTCAACCAGTCATTGTTTCTATTCCAATATGCCATTATGACGATACCGAATCTGCCAAAGCATCAAGGCGGCAGCTTAAGGAGGCAATATGCGCTGCCCTCTTTGACATGAATGTTCCTGCTATTTGTGCTGTCAACCAGGCTACTTTGGCTGTGTATGCTGCAAAACAAACTTCTGGAATAGCTGTTAATGTTGGTTTTCAGGTCACATCTATTGTTCCAATTCTGAATGGTAAAGTTATGCGCAAGGTGGGTGTGGAAGTTGTGGAACTGGGAGCAATCAAGCTTACAGGATTCCTTAGGGAGCTGATGCAACAGAACAACATGAATTTTGAATCTTCTTACACTGTTCGCACCCTAAAAGAGAAGCTATGCTATGCTGCTATTGATTATGAAGCTGAACTATCAAAAGATACACAAGCATCATTTGAAGCTGCAGGAGAAGGATGGTTTACACTTTCAAAAGAGCGGTTTCAGACAGGAGAGATCTTGTTCCAGCCTCGTCTTGCTGGATTGCAAGCAATGGGTTTGCACCAGGCTCTAGCCCTTTGTATGGACCATTGCCATTCTGCAGAATTAGCAGGTGACCCTGATTGGTTTAAGACTGTGGTTTTATCTGGGGGAACTGCATGTTTACCAGGTCTGGCAGAAAGGTTAGATAAGGAACTCCGTGAGTTATTACCTCCCCAGTTGTCCAGGGGAATCAAAGTCATACCTCCTCCATATGGTGCTGATACTGCATGGTTTGGAGCAAGAACTATTGGCAATTTGAGTACCTTTCCTGGTCCGTGGTGTATAAAGAAGAAGCACTTCCACAAGTCTCGACTCAATCTCATATGGTGA 1401 0.4475 MLLRKMWDSVLNRSSSGSNSNSPERFRCVDSPLGVFEQFPADIVIQILRLLDPKEAAKLSLVCKAWRSLASDNRLWIYFLQNYQLEPWETIFFAETNLRSGHPLPTLVGQMHQLSFKRIYGLREQVPGAVIIDGGSGYCKYGWSKYDRPSGRSATFLEFGNLETPMYTRLRHFFATIYSRMQVKPCTQPVIVSIPICHYDDTESAKASRRQLKEAICAALFDMNVPAICAVNQATLAVYAAKQTSGIAVNVGFQVTSIVPILNGKVMRKVGVEVVELGAIKLTGFLRELMQQNNMNFESSYTVRTLKEKLCYAAIDYEAELSKDTQASFEAAGEGWFTLSKERFQTGEILFQPRLAGLQAMGLHQALALCMDHCHSAELAGDPDWFKTVVLSGGTACLPGLAERLDKELRELLPPQLSRGIKVIPPPYGADTAWFGARTIGNLSTFPGPWCIKKKHFHKSRLNLIW 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1437 466 SUPERFAMILY F-box domain 32 92 IPR036047 GO:0005515
Lele26g1437 466 Gene3D - 173 458 - -
Lele26g1437 466 SUPERFAMILY Actin-like ATPase domain 128 249 IPR043129 -
Lele26g1437 466 MobiDBLite consensus disorder prediction 1 24 - -
Lele26g1437 466 SUPERFAMILY Actin-like ATPase domain 244 455 IPR043129 -
Lele26g1437 466 CDD NBD_sugar-kinase_HSP70_actin 130 274 - -
Lele26g1437 466 Gene3D - 31 102 - -
Lele26g1437 466 SMART fbox_2 39 79 IPR001810 GO:0005515
Lele26g1437 466 Pfam F-box-like 40 76 IPR001810 GO:0005515
Lele26g1437 466 Pfam Actin 202 454 IPR004000 -
Lele26g1437 466 MobiDBLite consensus disorder prediction 9 24 - -
Lele26g1437 466 SMART actin_3 127 457 IPR004000 -
Lele26g1437 466 Gene3D Actin; Chain A, domain 4 277 360 - -
Lele26g1437 466 ProSiteProfiles F-box domain profile. 33 79 IPR001810 GO:0005515
Lele26g1437 466 Gene3D - 234 432 - -
Lele26g1437 466 PANTHER ACTIN 171 458 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1437 Lele-ChrLele26 10098140 10104518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1437 176 456 Cytoskeleton Gene Families AT3G12110 31.379 8.00e-40 145