Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1430 ATGTTTTATAGTTTGATATCATTTGGACCTGCGAGATGTTATCGTCAGATAAAGAACAAGCCGTACCCGAAATCTCGATTCTGCCGGGGTGTACCTGACCCAAAGATCAGGATTTATGATGTTGGGATGAAAAAGAAAGGGGTTGATGAGTTCCCTTTCTGTGTACATCTTGTATCTTGGGAGAAGGAGAATGTTTCAAGTGAAGCTCTTGAGGCTGCTCGAATAGCATGCAACAAATACATGGCCAAGTATGCTGGGAAAGATGCTTTCCACCTTCGAGTTCGGGTTCATCCTTTCCATGTTCTGCGAATCAACAAGATGCTTTCATGTGCTGGTGCTGATAGGCTTCAGACAGGGATGAGAGGTGCTTTTGGGAAGCCACAAGGGACTTGTGCTAGAGTCAACATTGGCCAAGTTCTTCTATCTGTTCGTTGCAAGGACAGCAACAGCCACCATGCTCAAGAGGCTCTCCGCCGTGCTAAATTCAAGTTCCCCGGTCGCCAGAAGATAATTGTTAGCAGGAAGTGGGGATTTACCAAATTTAGCCGCGCAGACTATCTGAAGTTCAAGTCAGAGGGCCGAGTTGTGCCAGATGGAGTCAATGCCAAGGTTCTTGGGTGCCATGGACCTTTGGCCTTGCGGCAGCCTGGAAGAGCTTTCTTGCGAGCTAATGCATAA 678 0.4735 MFYSLISFGPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVNIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKSEGRVVPDGVNAKVLGCHGPLALRQPGRAFLRANA 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1430 225 CDD Ribosomal_L16_L10e 46 171 IPR016180 GO:0003735|GO:0005840|GO:0006412
Lele26g1430 225 FunFam 60S ribosomal protein L10 6 211 - -
Lele26g1430 225 TIGRFAM uL16_euk_arch: ribosomal protein uL16 9 179 IPR001197 GO:0003735|GO:0005840|GO:0006412
Lele26g1430 225 Pfam Ribosomal protein L16p/L10e 17 171 IPR016180 GO:0003735|GO:0005840|GO:0006412
Lele26g1430 225 PANTHER 60S RIBOSOMAL PROTEIN L10 10 218 IPR001197 GO:0003735|GO:0005840|GO:0006412
Lele26g1430 225 Gene3D Ribosomal protein L10e/L16 8 220 IPR036920 GO:0003735|GO:0005840|GO:0006412
Lele26g1430 225 ProSitePatterns Ribosomal protein L10e signature. 113 134 IPR018255 GO:0003735|GO:0005840|GO:0006412
Lele26g1430 225 SUPERFAMILY Ribosomal protein L16p/L10e 10 178 IPR036920 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1430 Lele-ChrLele26 10044640 10046565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1430 10 225 Cytoplasmic Ribosomal Protein Gene Family AT1G66580 85.648 9.88e-139 385