Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1429 ATGGCAAAGGGTTGCGCCACCTACACATATGAAGAGGCTCGGAAGCAACGGCTTGAAGAAAACAAAAAAAGATTTGAGGATCTGGGGATTTCAAAGATTTCAAAAAATTTATCTGAACTTGTCACACCAGAGAAGAAGGCTCCTCCGCAACGTCGACCAAAACAAAAATCAAATAGTAATGATGTCGTGGAACCAAGACGCTCTTCTCGTGTGCGAAATTCTGTTCCTTCATATCGTGAGGAGGTATTCATAGACCTTCCACCTTTGCGGAAGAGGTCGAGGTCGTCTTCAACATCTTGGGGAAGTTATGTTGCAAGGCCACTAGAAGAAATCAAAGAAGCCACAGATGAAGAAAGAAATCGTGCTTTCATGGCTGCAGAATCACTTCTAAGCGATTTACAGACTTCAAATCCAACATTCATCAAGTCAATGGTCCGGTCTCATGTTTATAGTTGCTTTTGGTTGGGTCTGCCTACTAGATTTTGCCAAGATCATCTTCCAAAGACTGCGTCTGACATGATTTTAGAGGATGAAAATGGCTCAGAATTTGAGGCTGTTTTCCTTGGCAATAGAACTGGGATTAGTGGAGGCTGGAGAGGATTTGCATTGGATCATAAGTTGGATGATGGTGATGCACTGGTTTTTGAATTGGTTGAACCTACAAGATTTAAGATTTACATTGTGAAAGCCTTTCCAGAATCAGCTGAAGATGGAGAGGAGATTTTGGATGAACAAGCTTATACTTGTGCAACCAAGAAGCACAAATCACAACCAAACAAGACACAAATTCCTAAAGAATCTGCAAATTCTCAGGAACACAAAGCAGAAAATAACGTTGACAATGAAATCGAGCCACAAGGGCCAAACACAACCAGGAAAACTAGGTTTTCTCGGAGAAAACCTCAGAATGAATATAAAGATTGTAGACTGCTTCCTTCTGATGATTCAATAAAGGAAGAAAATATTGAAGAGGGGAAAAATTGTACTACTGAGAAAGCAAATTCTCAAGCAAACAAAAGAAGGTCAAAACGTGGTACACGAAAATAA 1047 0.4031 MAKGCATYTYEEARKQRLEENKKRFEDLGISKISKNLSELVTPEKKAPPQRRPKQKSNSNDVVEPRRSSRVRNSVPSYREEVFIDLPPLRKRSRSSSTSWGSYVARPLEEIKEATDEERNRAFMAAESLLSDLQTSNPTFIKSMVRSHVYSCFWLGLPTRFCQDHLPKTASDMILEDENGSEFEAVFLGNRTGISGGWRGFALDHKLDDGDALVFELVEPTRFKIYIVKAFPESAEDGEEILDEQAYTCATKKHKSQPNKTQIPKESANSQEHKAENNVDNEIEPQGPNTTRKTRFSRRKPQNEYKDCRLLPSDDSIKEENIEEGKNCTTEKANSQANKRRSKRGTRK 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1429 348 SMART B3_2 140 231 IPR003340 GO:0003677
Lele26g1429 348 MobiDBLite consensus disorder prediction 251 266 - -
Lele26g1429 348 Gene3D - 114 231 IPR015300 -
Lele26g1429 348 ProSiteProfiles B3 DNA-binding domain profile. 140 231 IPR003340 GO:0003677
Lele26g1429 348 Pfam B3 DNA binding domain 140 227 IPR003340 GO:0003677
Lele26g1429 348 MobiDBLite consensus disorder prediction 297 327 - -
Lele26g1429 348 MobiDBLite consensus disorder prediction 251 348 - -
Lele26g1429 348 MobiDBLite consensus disorder prediction 36 74 - -
Lele26g1429 348 Coils Coil 8 28 - -
Lele26g1429 348 CDD B3_DNA 138 229 IPR003340 GO:0003677
Lele26g1429 348 MobiDBLite consensus disorder prediction 45 68 - -
Lele26g1429 348 SUPERFAMILY DNA-binding pseudobarrel domain 134 229 IPR015300 -
Lele26g1429 348 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 36 230 IPR044837 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1429 Lele-ChrLele26 10040188 10043511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1429 10 230 B3 DNA Binding Superfamily AT5G58280 50.400 3.85e-72 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele26g1429 B3 7.7e-16 CL0405