Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1422 ATGAAATCTACGATCCCTATCCCACCACCACCATCACTGGAGAAATTTGACAGCTTTGAATTTAAAGGAATGCTTGCTGCTGCTTCTTTTACTTCCAAACGCATTCGAGCTTCGGAGTTTCTTCAACGTGATGGTAGACCCGTGATGGTATCACGCGGGTCCACTGCTAAAAGTTATTTTGAAAATTATGCTTTTGTTGATTTGAGCTGGAACCGTGGGATTAGCAATCGAGTTCGCTCGATTGTTAGTCTTTCTGGCATCAGCACATTCCCTAGTCGTAGTAGGATTAGGAGAGATTGCTTTAGGGTCAATCCGACTGCTCCCAGAAGATCTACAAGTTTACTTCATGGTATAAAGGGGTTTCTCTCTGATTCATCACCTTCTAATTCCTATTCTTCACTATATGGCAGAGTAACCAGACCAGGCTTTTCACAACCTGTTAGTTCACATGCCCTTCTTGGTTCAACGGCAGACGGGCGAGCATTATTCTCAACTTCAACTAAAACTGATGATGGAACGTCCTCAAAGAAGATCGAGAGCCAGAACCAAAAAACTACTACCACAATTGTTAAAACTTCTTCAGGGGAACAAGTTGCTGACATTAAAATTCTCCGGACACTTGCGAGTTACTTGTGGATGAAGGATAATCTCGAATTCCGATTCCGGGTTATTGCTGCTTTGGGTTTTCTTGTTGGTGCTAAGGTTCTGAATGTTCAGGTCCCTTTCCTATTCAAGCTTGCAGTTGATTGGTTGACGACTGCTATAGGAAATGCTGGTGATCTTGCTTCTTTTACAGCTGCAAACTCAACTCTGTTAGCTTTTTTCGCAACTCCAGCATCTGTGTTAATCGGATATGGAATTGCTCGTTCAGGAGCTGCTGCTTTCAATGAACTGCGTACTGCTGTATTCTCTAAGGTGGCATTGCGAACAATTCGATTAGTATCTATAAAGGTGTTCCTACATTTGCATGAGCTTGACCTACGCTATCATCTAAGTCGAGAAACTGGAGCATTAAATAGAATAATTGATCGTGGTAGTCGTGCAATGAATTTTATACTCTCATCTATGGTGTTCAACGTAGTACCCACTATATTAGAGATATCTATGGTATCAGGTATACTGGCTTACAAATTTGGAGCACCTTTTGCATTGATCACATCCTTATCAGTTGCTGCTTATGTTATTTTTACACTGACTGTGACACAGTGGAGGACTAAATTCAGGAAGGCCATGAATAAAGCTGATAATGATGCGAGTACCAGGGTGGTCGATTCACTCATTAATTATGAGACTGTCAAATATTTCAATAATGAAGATTATGAAGGTGAAAAATATGATGAGTACCTAAAGAGGTATGAGGATGCTGCTCTGAAAACACAACGCAGTCTTGCTTCTCTGAACTTTGGTCAAAATGTGATATTTAGTACTGCACTTTCTACGGCAATGGTGTTGTCTTCTCATGGGATTATGAGCGGCCAGATGACCGTTGGTGATTTGGTGATGGTGAACGGGCTCCTCTTCCAACTTTCTCTTCCTCTCAATTTCCTTGGCAGTGTTTATCGTGAGACTATACAGAGTTTAGTTGACATGAAGGCAATGTTTCAGTTACTCGAGGAAAGAGCTGATGTTAGGGATAAAGACAATGCAAAGCCGCTGGAATTAAATGGAGGGAGGATAGAGTTTGAAAATGTACACTTCAGTTACCTTGCAGAGAGAAAAATACTTGATGGAATATCTCTGGTTGTGCCAGCTGGAAAAAGTGTGGCAATTGTTGGAACTAGTGGAAGTGGTAAGGTTCAGCATGAAGGATTACTGGAATTGCACCAGATTTCTTCATTCTCTTCAATTATTTTGCTTTCTGAGATTTACCTTTATTTTCTTGGTAAATCAACCATTCTTAGATTGCTCTTCAGGTTTTTTGACCCTCATTCCGGAAGTATGTTGCACCTATCCAACATAAAGATAGATGGTCAAAATATCCAGGATGTTACCCTTGATAGTCTTCGGAAGTCTATTGGTGTTGTTCCACAAGATACGGTACTTTTCAATGATACAATATTTCACAACATCCATTATGGGCGACTTTCAGCCACTAAAGAGGAAGTCTATAAAGCTGCTCAACAAGCAGCAATTCATGACACTATCATGAATTTTCCTGAAAGATATTCAACTGTTGTGGGAGAGCGAGGACTCAAGTTAAGTGGTGGTGAGAAGCAACGTGTTGCCTTAGCTCGTGCATTTTTGAAAGCACCTCCAATTCTGTTATGTGATGAAGCTACGAGTGCACTTGACAGCACAACGGAAGCAGAGATATTAAATGCTTTGAAATCCTTAGCAAATAATCGCACTTCCATTTTCATTGCTCACAGGCTTACTACTGCAATGCAGTGTGATGAGATCATAGTGTTGGAAAATGGAAAGGTGGTTGAACAAGGACCACATGAACTGCTCTTATCTAGGGCGGGAAGATATGCACAACTTTGGGCCCAGCAAAATAACACGGTTGATGCTCTGCAGCAATGA 2523 0.411 MKSTIPIPPPPSLEKFDSFEFKGMLAAASFTSKRIRASEFLQRDGRPVMVSRGSTAKSYFENYAFVDLSWNRGISNRVRSIVSLSGISTFPSRSRIRRDCFRVNPTAPRRSTSLLHGIKGFLSDSSPSNSYSSLYGRVTRPGFSQPVSSHALLGSTADGRALFSTSTKTDDGTSSKKIESQNQKTTTTIVKTSSGEQVADIKILRTLASYLWMKDNLEFRFRVIAALGFLVGAKVLNVQVPFLFKLAVDWLTTAIGNAGDLASFTAANSTLLAFFATPASVLIGYGIARSGAAAFNELRTAVFSKVALRTIRLVSIKVFLHLHELDLRYHLSRETGALNRIIDRGSRAMNFILSSMVFNVVPTILEISMVSGILAYKFGAPFALITSLSVAAYVIFTLTVTQWRTKFRKAMNKADNDASTRVVDSLINYETVKYFNNEDYEGEKYDEYLKRYEDAALKTQRSLASLNFGQNVIFSTALSTAMVLSSHGIMSGQMTVGDLVMVNGLLFQLSLPLNFLGSVYRETIQSLVDMKAMFQLLEERADVRDKDNAKPLELNGGRIEFENVHFSYLAERKILDGISLVVPAGKSVAIVGTSGSGKVQHEGLLELHQISSFSSIILLSEIYLYFLGKSTILRLLFRFFDPHSGSMLHLSNIKIDGQNIQDVTLDSLRKSIGVVPQDTVLFNDTIFHNIHYGRLSATKEEVYKAAQQAAIHDTIMNFPERYSTVVGERGLKLSGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVVEQGPHELLLSRAGRYAQLWAQQNNTVDALQQ 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1422 840 FunFam ATP-binding cassette sub-family B member 7 195 547 - -
Lele26g1422 840 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 224 525 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele26g1422 840 CDD ABCC_ATM1_transporter 559 831 - -
Lele26g1422 840 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 533 598 IPR027417 -
Lele26g1422 840 Pfam ABC transporter 628 761 IPR003439 GO:0005524
Lele26g1422 840 SMART AAA_5 619 807 IPR003593 -
Lele26g1422 840 SUPERFAMILY ABC transporter transmembrane region 218 538 IPR036640 GO:0005524|GO:0016020
Lele26g1422 840 FunFam Multidrug ABC transporter ATP-binding protein 627 837 - -
Lele26g1422 840 Pfam ABC transporter transmembrane region 224 512 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele26g1422 840 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 628 827 IPR039421 -
Lele26g1422 840 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 628 831 IPR027417 -
Lele26g1422 840 Gene3D ABC transporter type 1, transmembrane domain 210 549 IPR036640 GO:0005524|GO:0016020
Lele26g1422 840 ProSitePatterns ABC transporters family signature. 733 747 IPR017871 GO:0005524|GO:0016887
Lele26g1422 840 Gene3D - 552 608 IPR027417 -
Lele26g1422 840 Gene3D - 628 834 IPR027417 -
Lele26g1422 840 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 559 830 IPR003439 GO:0005524
Lele26g1422 840 CDD ABC_6TM_ATM1_ABCB7 226 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1422 Lele-ChrLele26 9976330 9986834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1422 395 832 Calmodulin-binding Proteins AT2G36910 33.185 1.56e-56 209