Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1401 ATGACAAAAAGGCAAGTCATTAGGGTTTCCTTAAAGCTTCGCTCTCATCAAAACCACTTCCTTTTTCCTATCTCACTCGGTGCGTTTGTGTGTTCCAACCTCCAGAGTAACGTCAGGATGGCCGCCGTGGTTGAACAGCCGCCAACTCACGAGCTCTCCGAAACAGTCATCGACGTCAAGCTCTTCAATCGCTGGACCTTTGACGATGTTCAGGTAAACGACATTTCCTTGGCTGATTACATTGGTGTGGCTCCTGCCAAGCATGCTACCTATGTGCCTCACACTGCTGGGAGATATTCAGTCAAGCGATTCAGGAAAGCACAGTGTCCAATTGTTGAGAGGCTTACCAACTCTCTTATGATGCATGGACGAAACAATGGGAAAAAACTAATGGCAGTGAGGATTATTAAGCATGCGATGGAAATTATCCACTTGCTAACTGATCTAAACCCCATCCAAGTTATTGTTGATGCTGTGATCAACAGTGGACCAAGAGAAGATGCTACACGTATTGGATCTGCTGGGGTTGTCAGACGTCAGGCTGTGGATATTTCACCTTTGCGACGTGTGAATCAGGCCATTTACCTCCTTACTACAGGAGCTCGTGAGTCTGCATTCAGGAACATTAAGACCATTGCAGAATGCTTGGCTGATGAACTTATCAATGCTGCAAAGGGATCATCAAACAGCTACGCCATCAAGAAGAAGGATGAGATCGAGAGGGTTGCTAAGGCCAACCGTTGA 744 0.4651 MTKRQVIRVSLKLRSHQNHFLFPISLGAFVCSNLQSNVRMAAVVEQPPTHELSETVIDVKLFNRWTFDDVQVNDISLADYIGVAPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1401 247 Pfam Ribosomal protein S7p/S5e 101 247 IPR023798 -
Lele26g1401 247 ProSitePatterns Ribosomal protein S7 signature. 113 139 IPR020606 GO:0003723|GO:0003735|GO:0006412
Lele26g1401 247 CDD uS7_Eukaryote 60 247 IPR005716 GO:0003735|GO:0006412|GO:0015935
Lele26g1401 247 Gene3D Ribosomal protein S7 domain 40 247 IPR036823 -
Lele26g1401 247 PANTHER RIBOSOMAL PROTEIN S7 42 247 IPR000235 GO:0006412
Lele26g1401 247 TIGRFAM uS7_euk_arch: ribosomal protein uS7 59 247 IPR005716 GO:0003735|GO:0006412|GO:0015935
Lele26g1401 247 SUPERFAMILY Ribosomal protein S7 60 247 IPR036823 -
Lele26g1401 247 FunFam 40S ribosomal protein S5 42 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1401 Lele-ChrLele26 9838074 9839828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1401 58 247 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 92.105 7.04e-134 374