Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1391 ATGATTCTTTCAACATCAGGGTTTGTCCAGCAGGGACATGAAGAAGTGGAGAAGAAGTGCTTGAATTCGGAGCTGTGGCATGCATGTGCTGGACCCCTGGTATCACTACCAAATGCGGATACTCGTGTTGTTTACTTCCCTCAGGGTCATAGCGAGCAGGTTGCGGCCACAACTAATAGGGGAGTTGATGGGCAAATACCTAATTATCCAAGCTTGCTGCCCCAGTTGATTTGCCAACTTCATAATGTCACAATGCACGCAGATGTTGAAACAGATGAAGTGTATGCTCAAATGACTCTGCAGCCACTGACTCCGCAAGAGCAAAAGGAAACTTTTCTCCCTATGGAATTGGGCATAACAAGTAAGCAGCCCTCAAATTATTTTTGCAAGACATTAACAGCAAGCGACACTAGCACACATGGAGGCTTCTCTGTTCCTCGTCGTGCAGCTGAAAAAGTCTTCCCTCCCCTGGATTACTCACAGCAACCACCAGCTCAAGAACTAATTGCTAGAGATCTCCATGATGTTGAGTGGAAGTTTCGTCATGTTTTTCGGGGACAGCCAAAACGTCACCTTCTTACAACAGGTTGGAGCGTATTTGTTAGTGCCAAGAGACTTGTAGCTGGAGATTCTGTGCTTTTTATATGGAATGAAAAGAATCAGCTTCTTTTGGGAATACGTCATGCCAATAGACCACAAACTTTGATTCCTTCATCAGTTCTATCAAATGATAGTATGCACATTGGATTGCTTGCAGCTGCTGCTCATGCTGCTGCAACTAGTAGCTGCTTTACTGTCTTCTATAATCCAAGGGCTTGTCCATCTGAGTTCGTTATTCCTCTTTCAAAATATATCAAAGCTGTGTACCATACATGTGTTTCGGTTGGTTTGCGTTTCAGAATGCTATTTGAGACTGATGAGTCAAGTGTTCGCAGATACATGGGTACAATAACTGGTATAAGTGATCTGGATCCTGTTCGCTGGCCAAACTCTCACTGGCGATCAGTAAAGGTTGGTTGGGATGAATCAACAGTAGGAGAAAGACGGCCAAGGGTATCATTGTGGGAAATTGAGCCTTTGACAACATTCCCAATGTATCCATCACTATTTCCCCTGAGATTTAAACGTCCATGCTATCCCAGCCCCTCATCTGCGAATGATGGCAGAGATGATGCAACTAATGGGCTAATGTGGCTGAGAGGGGGAGCTGGAGAACATAATTTGAACTCTTTAAACTTTCAGAGTGGCAGTGTGTTGCCGTGGATGCAGCAGAGGTTGGATCCAGCTTTGTTAGGAAATAATTATAATCAGCAGAACCAAGCATTGTTAGCAGCCGGTTTGCAGAACCCAGGGAATGGAGATCTACTGAGGCAACAAATGCTGCATTTTCAGCAGCCTTTCCCGTTTCTTCAACAATCAGGAAACCATAATCCTTCTTTGCAACTTCAGCAGAAGCAAGCAATTCAGCAATCAGTCTCATCCAATATTCTGCAGCCACAAGCGCATGTATCGACAGAGAACCTGTCACAGAACCTTCTTCAGAAACAACATAACATTAACAATCAGGAAGACCAAGCACACCAGCAGAATAATACTTATCATGATTCGCGCTTGATTCAAAATGATCAGTTCCACCGAAGGCAACACTCTAACGTGCCTTCACCATCATATTCAAAACAGGATTTCTTGGACTCAAGCATGAAGTTCGCTTCATCAATTTTGCCCATACAAAATGTACTTGGTTCACTGTGTCCTGAAGGGAGTGGTAGGGATATTTTAAACCTACCCAGAACCAGTCCGTCCATGGTGACTGAACAAGTGCCCCACCAATCTTGGACATTGAAGTATCCACCTGTGCAGGTCAGTGCCTTTGGCAATTTGATGTCACAAGCAGAGTATAGTGGGAAACATTCTGCATCATCTCCTCCACAATGTACTTCAGATAACCAAAATCCTACTTTCTTTTGTAATATCGATTCATCTGGCCTCGTGCTCCCAACTACAGTCCCGGGTTACACACCTTCATCAGTTGATACTGATACCTCAACTATGCAAATACGGAATCCTGGATTTCTGGGTCATCCATATGCTTGCATGCAAGATTCATCAGAATTATTGCAAAGTTCGGGGCAGGTTGACTCACAAAATCAAACCCAGACATTTGTGAAGGTTTACAAATCAGGGTCAGTTGGGCGCTCACTCGACATTTCCCGGTTCAGCAGCTATCATGAACTGAGAGAGGAGTTGGCTCAGATGTATGGAATTGAGGGGGAAGACCCTCTTAGATCAGGCTGGCAGCTTGTATTTGTCGACAGGGAGAATGACATGCTTCTCCTCGGCGACGATCCGTGGGAATCATTCGTCAATAATGTTTGGTACATCAAGATACTTTCACCTGAAGATGTCCAGAAAATGGGCGACCAAGTGGCAGGACTGGAATCTTTAGGTCCTTAG 2454 0.4454 MILSTSGFVQQGHEEVEKKCLNSELWHACAGPLVSLPNADTRVVYFPQGHSEQVAATTNRGVDGQIPNYPSLLPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKETFLPMELGITSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLHDVEWKFRHVFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRHANRPQTLIPSSVLSNDSMHIGLLAAAAHAAATSSCFTVFYNPRACPSEFVIPLSKYIKAVYHTCVSVGLRFRMLFETDESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTVGERRPRVSLWEIEPLTTFPMYPSLFPLRFKRPCYPSPSSANDGRDDATNGLMWLRGGAGEHNLNSLNFQSGSVLPWMQQRLDPALLGNNYNQQNQALLAAGLQNPGNGDLLRQQMLHFQQPFPFLQQSGNHNPSLQLQQKQAIQQSVSSNILQPQAHVSTENLSQNLLQKQHNINNQEDQAHQQNNTYHDSRLIQNDQFHRRQHSNVPSPSYSKQDFLDSSMKFASSILPIQNVLGSLCPEGSGRDILNLPRTSPSMVTEQVPHQSWTLKYPPVQVSAFGNLMSQAEYSGKHSASSPPQCTSDNQNPTFFCNIDSSGLVLPTTVPGYTPSSVDTDTSTMQIRNPGFLGHPYACMQDSSELLQSSGQVDSQNQTQTFVKVYKSGSVGRSLDISRFSSYHELREELAQMYGIEGEDPLRSGWQLVFVDRENDMLLLGDDPWESFVNNVWYIKILSPEDVQKMGDQVAGLESLGP 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1391 817 Coils Coil 505 525 - -
Lele26g1391 817 Gene3D - 714 806 - -
Lele26g1391 817 ProSiteProfiles PB1 domain profile. 719 801 IPR000270 GO:0005515
Lele26g1391 817 SMART B3_2 128 230 IPR003340 GO:0003677
Lele26g1391 817 SUPERFAMILY DNA-binding pseudobarrel domain 112 257 IPR015300 -
Lele26g1391 817 CDD B3_DNA 127 220 IPR003340 GO:0003677
Lele26g1391 817 FunFam Auxin response factor 126 230 - -
Lele26g1391 817 Gene3D - 126 229 IPR015300 -
Lele26g1391 817 ProSiteProfiles B3 DNA-binding domain profile. 128 230 IPR003340 GO:0003677
Lele26g1391 817 Gene3D - 292 364 - -
Lele26g1391 817 Pfam Auxin response factor 254 337 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele26g1391 817 FunFam Auxin response factor 292 364 - -
Lele26g1391 817 SUPERFAMILY CAD & PB1 domains 710 791 - -
Lele26g1391 817 FunFam Auxin response factor 714 806 - -
Lele26g1391 817 Pfam B3 DNA binding domain 128 229 IPR003340 GO:0003677
Lele26g1391 817 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 806 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1391 Lele-ChrLele26 9767630 9777961 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1391 98 817 B3 DNA Binding Superfamily AT5G37020 64.658 0.0 863
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele26g1391 B3 8.4e-20 CL0405