Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1387 ATGCTTCAACCTCGTAATCTTCTTCTTCCCTTATTTATCTTCATGTTCTTGTCATTCCGGATCCATAACGGCGTCGTTTCGGAGCCTCGAACCTATCTTCTGAGGAGTGAGTGTAACCCATACTTCATTTCCAACGTATTTGTCGACTCCAACGTCACCGTCTTCAATCAAAACCTAAACGCAACGTTGCGAGACATAAAAGAGAAGATCAGAGTTCATAACAAGCACTTCGCCACCGCACAGCAAGCCAATGGAGGAAACCCCGCTGCCACTCTTTTTCAGTGCAGAAACTACCTCTCCACCGCCGACTGCGTCTCCTGCTTCGATGCCGCTACCGAGCATATCCGAAGATGTGCCGCCGGGACCTCTGGTGCCCATGTCGTCTACGACGGGTGCTTCCTCAGGTTCGATATTAGCAGTAGCTTCTTTGAGGAGACGACGCAAAATTTCAACATGGTATCATGTGGGAATCAGACTACGGAAGGAGAAGCCATTACATTTACATCAGATGCACAAAAAGTGTTAAGGAATCTGCAAAGAGCAACACCCAGAATCACAGGTTTCTCTGTAGCTACGAAGAAGCAAGTTCCTAATGGTCCAATAACTATTTATGGATTTGCTCAATGTATTGAAACTATCACTCAAAGTAAGTGTGAGGATTGCTTGAATGCTCAGTACAACAATATGCAGACTTGTCTTCCCAATTCAGATGGTAGGGCTTCTGCTAATGGCTGCTTCTTGAGATATTCCACCACTTCCTTCTTTCCTGATAACCAGACCATCGATATTACACCCTTCAAAAAACAAGGTTCAAGTACCAATAAGGGGATCATTATTGGTGTAGTTGTTGCAGGCGTATCTCTTGCTTTGATCCTCATTGCATTATTTGTCTTGATTAGCCGACGAAAAAACCCTAAGATAATCAGTGTTCCTAGAGGAGACATACCTGGAGCAAGCAAGCTAAAAGGTACAGTTACTTTTAGTTACAAGGATTTGAAGACCGCAACCAATAATTTTAGTGAAGAAAATAAAATAGGAGAAGGTGGATTTGGCGTTGTATACAAGGGTACTTTGGCGAATGGGAAAGTAGTTGCAATCAAGAAATTAGCTGTACACCGCTCCAATAAGATAGATGACGAATTTGAAAGTGAAGTGAAGCTGATAAGTAATGTTCATCACCGGAATCTTGTTCGACTTCTGGGATGTTGTAGTAAAGGCGACAACAGAATCCTTGTTTATGAATACATGAAAAACAACAGTCTCGACAGATTCTTATTTGGTAAAAAGAAAAGTTCTCTCAATTGGAAGCAACGATATGAAGTTATTTTAGGAATAGCAAAGGGTTTGACTTATCTACACGAAGAATTTCATGTTCGCATTATACATAGAGATATAAAGACTAACAATATCCTCTTAGACGATGATATACAACCTAGAATTGCTGATTTTGGGCTGGCAAGGCTTATACCCAAAGACAAAACTCATCTCAAGACGAAATTTGCAGGAACATTAGGATACACGGCACCAGAGTATGCAATTCATGGCCAATTATCAGAAAAAGTTGATATCTATAGTTACGGAGTTGTTGTGTTAGAAATCATCAGTGGTCAGAGGAGTAATAAATTAAATGTTGCCGGTGATGAAGAAGGCACATACCTCCTTCAAAAAGCTTGGAAATTATATGAGAGAGGCATGCACTTAGAGTTGGTGGACAATGCTTTAGACCCTAAAGATTATGACGCAGAGGAAGTTCAAAAAGTTATAGAGATAGGTTTGCTTTGCACGCAAGCATATGCAGAAACAAGGCCGATGATGTCTGAAATAGTGGTTTTACTACAGAAGAAGGGTTTATTAGAGAATATGAGGCCAACTATGCCTATCTTAATTGAAACTAATTAG 1899 0.4076 MLQPRNLLLPLFIFMFLSFRIHNGVVSEPRTYLLRSECNPYFISNVFVDSNVTVFNQNLNATLRDIKEKIRVHNKHFATAQQANGGNPAATLFQCRNYLSTADCVSCFDAATEHIRRCAAGTSGAHVVYDGCFLRFDISSSFFEETTQNFNMVSCGNQTTEGEAITFTSDAQKVLRNLQRATPRITGFSVATKKQVPNGPITIYGFAQCIETITQSKCEDCLNAQYNNMQTCLPNSDGRASANGCFLRYSTTSFFPDNQTIDITPFKKQGSSTNKGIIIGVVVAGVSLALILIALFVLISRRKNPKIISVPRGDIPGASKLKGTVTFSYKDLKTATNNFSEENKIGEGGFGVVYKGTLANGKVVAIKKLAVHRSNKIDDEFESEVKLISNVHHRNLVRLLGCCSKGDNRILVYEYMKNNSLDRFLFGKKKSSLNWKQRYEVILGIAKGLTYLHEEFHVRIIHRDIKTNNILLDDDIQPRIADFGLARLIPKDKTHLKTKFAGTLGYTAPEYAIHGQLSEKVDIYSYGVVVLEIISGQRSNKLNVAGDEEGTYLLQKAWKLYERGMHLELVDNALDPKDYDAEEVQKVIEIGLLCTQAYAETRPMMSEIVVLLQKKGLLENMRPTMPILIETN 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1387 632 Gene3D Phosphorylase Kinase; domain 1 315 415 - -
Lele26g1387 632 Gene3D Transferase(Phosphotransferase) domain 1 416 622 - -
Lele26g1387 632 ProSiteProfiles Protein kinase domain profile. 339 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1387 632 CDD STKc_IRAK 345 614 - -
Lele26g1387 632 FunFam Cysteine-rich receptor-like protein kinase 2 150 254 - -
Lele26g1387 632 Coils Coil 56 76 - -
Lele26g1387 632 Gene3D - 38 140 IPR038408 -
Lele26g1387 632 Gene3D - 147 254 IPR038408 -
Lele26g1387 632 FunFam Cysteine-rich receptor-like protein kinase 2 309 415 - -
Lele26g1387 632 SMART serkin_6 339 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1387 632 FunFam Cysteine-rich receptor-like protein kinase 2 416 620 - -
Lele26g1387 632 Pfam Salt stress response/antifungal 51 137 IPR002902 -
Lele26g1387 632 Pfam Salt stress response/antifungal 155 251 IPR002902 -
Lele26g1387 632 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 92 629 - -
Lele26g1387 632 ProSitePatterns Protein kinases ATP-binding region signature. 345 368 IPR017441 GO:0005524
Lele26g1387 632 Pfam Protein kinase domain 340 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1387 632 ProSiteProfiles Gnk2-homologous domain profile. 149 254 IPR002902 -
Lele26g1387 632 ProSiteProfiles Gnk2-homologous domain profile. 37 141 IPR002902 -
Lele26g1387 632 SUPERFAMILY Protein kinase-like (PK-like) 322 612 IPR011009 -
Lele26g1387 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1387 Lele-ChrLele26 9745788 9751171 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1387 8 630 Receptor kinase-like Gene Family AT1G70520 35.906 2.14e-122 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele26g1387 Pkinase 6.6e-51 CL0016