Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1385 ATGCGAAGCCTGAGAGAGCAGGTCAGCAACAAAAGCAAACACACCGCGACGGCTCAGGGGGTGAAGGGCAACTTTCCGGCGTTTGGCGTTTTTCAGTGTAGGAACTACCTCTCCATCAAAGATTGCCTCGCTTGCTTCGACTTCGCCGCCGTTCGTATATACGACAACTGTTCAGTCGCCTCTACCGGAGCCCGTCTCATTTACGAAGGTTGCTTCCTCAGGTTTGAGAGCAGTATTTTCTTCGACCAGTCCACAGACGGTGGCAACCACATTGCGTGTGGGGATCGTGTGGCTAAAAACTCCACTGAACTTGCTTCAACTGCGCAACAAGTGCTAAACAATCTGGTAGAAGCAACACCAAGAATACCTGGTTACTTTGCAGCCACTATAACACCAGTTCCTAACGGTAATGGTTCGAATATTTATGCCTTTGCTCAATGTCTCGAGACTATCACTCAAAGTGGTTGCCAGGATTGCTTGGAGGCTGGCTTCAGAAATTTTCAGATTTGTCTTCCCAACTCAAATGCTAAGATCTTTTATGCTGGTTGTTTCATGAGATACTCCACCTCTGCATTTTTTGCTCATAATCAGACCACTGATATCAAGCACATCTTGAAACAAGGAGATTCAAGCAAGAAGGCCATTATTGGTGGAGTCGTTGGAGGTGCTTCTTTTATTTTGATTCTCCTAGCATTATTTGCTTTGTATGGACGATCATTGTCCAAGAGGGTTCATAGAGTTGACATTTCGGGAGCAACTGAGTTGAAAGGCCCAGTTAACTATCGGTATAAAGACCTAAAGTCTGCAACAAAAAATTTCAGTATAGAGAATAAATTAGGAGAAGGAGGTTTTGGGGATGTATACAAGGGTACTCTGAAAAATGGAGAAGTAATTGCTATAAAGAAATTGGCTTTAGAGCTATCCAAAAAGATGGATGAAGATTTTGAAAGTGAAGTGAAGCTAATAAGTAATGTTCATCATCGAAATCTTGTTCGACTTCTCGGATGTTGCAGCAAAGGCAAAGAGAGATTCCTCGTTTATGAGTACATGAAGAACAACAATGTTGGCCAATTCTTATTTGGTGAAAATAAAGGTTCTCTCAACTGGAAGCAGCGTTATGGTATAATTCTAGGCACTGCAAGGGGTTTGGCTTATCTTCACGAGGGATTCCATGTTTGCATCATACATAGAGATATAAAGCCTAGCAACATCCTCTTGGATGATGACTTCCAGCCTAAAATTGCAGATTTTGGATTGGCAAGGCTTTTGCCAAGGGACCAATCTCATCTGAATACAAATTTTGCAGGAACAATGGGATACACTGCACCTGAGTATGTAATGCATGGACAATTATCAGAAAAGGTTGATATCTATTGCTATGGTGTCGTAGTGTTAGAAATCATAAGTGGGCAAAAGAGTGGTGAATTAAAGGATGATGATGAAGGCGAATTCCTCCTTCAAAGGGCTTGGAAACTTTATGAGAAAGGAATGCACATAGAGTTTGTGGACAAAACCTTAGATCCAGAAGAGTATGACGCAGAAGAAGTAAAGAAAATCATAGAGATTGGATTGCTTTGCACGCAATCATCTCCTGCAGCAAGACCAACAATGTTTGAAGTTGCCGATATGATCGAAAGCAAGGGTGGCTTAATGGATCACAAGCGACCCACTATGCCTGTGTATGTTGATCATAATTTGAGGCTCAAAAGAGATGGTCAGTCTGATGGTTCATCTTTATCAAACGCTACTGTCTCCATTTCTATTCCATCAGGAAGGTGA 1779 0.421 MRSLREQVSNKSKHTATAQGVKGNFPAFGVFQCRNYLSIKDCLACFDFAAVRIYDNCSVASTGARLIYEGCFLRFESSIFFDQSTDGGNHIACGDRVAKNSTELASTAQQVLNNLVEATPRIPGYFAATITPVPNGNGSNIYAFAQCLETITQSGCQDCLEAGFRNFQICLPNSNAKIFYAGCFMRYSTSAFFAHNQTTDIKHILKQGDSSKKAIIGGVVGGASFILILLALFALYGRSLSKRVHRVDISGATELKGPVNYRYKDLKSATKNFSIENKLGEGGFGDVYKGTLKNGEVIAIKKLALELSKKMDEDFESEVKLISNVHHRNLVRLLGCCSKGKERFLVYEYMKNNNVGQFLFGENKGSLNWKQRYGIILGTARGLAYLHEGFHVCIIHRDIKPSNILLDDDFQPKIADFGLARLLPRDQSHLNTNFAGTMGYTAPEYVMHGQLSEKVDIYCYGVVVLEIISGQKSGELKDDDEGEFLLQRAWKLYEKGMHIEFVDKTLDPEEYDAEEVKKIIEIGLLCTQSSPAARPTMFEVADMIESKGGLMDHKRPTMPVYVDHNLRLKRDGQSDGSSLSNATVSISIPSGR 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1385 592 FunFam Cysteine-rich receptor-like protein kinase 2 88 192 - -
Lele26g1385 592 SMART serkin_6 273 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1385 592 FunFam Cysteine-rich receptor-like protein kinase 2 350 552 - -
Lele26g1385 592 ProSitePatterns Protein kinases ATP-binding region signature. 279 302 IPR017441 GO:0005524
Lele26g1385 592 Pfam Protein kinase domain 274 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1385 592 ProSiteProfiles Gnk2-homologous domain profile. 1 80 IPR002902 -
Lele26g1385 592 ProSiteProfiles Gnk2-homologous domain profile. 86 192 IPR002902 -
Lele26g1385 592 SUPERFAMILY Protein kinase-like (PK-like) 258 567 IPR011009 -
Lele26g1385 592 Gene3D Transferase(Phosphotransferase) domain 1 350 558 - -
Lele26g1385 592 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 31 569 - -
Lele26g1385 592 CDD STKc_IRAK 279 545 - -
Lele26g1385 592 FunFam Cysteine-rich receptor-like protein kinase 2 241 349 - -
Lele26g1385 592 ProSitePatterns Serine/Threonine protein kinases active-site signature. 394 406 IPR008271 GO:0004672|GO:0006468
Lele26g1385 592 MobiDBLite consensus disorder prediction 571 592 - -
Lele26g1385 592 MobiDBLite consensus disorder prediction 572 592 - -
Lele26g1385 592 Gene3D Phosphorylase Kinase; domain 1 238 349 - -
Lele26g1385 592 ProSiteProfiles Protein kinase domain profile. 273 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1385 592 Gene3D - 1 80 IPR038408 -
Lele26g1385 592 Gene3D - 89 192 IPR038408 -
Lele26g1385 592 Pfam Salt stress response/antifungal 3 77 IPR002902 -
Lele26g1385 592 Pfam Salt stress response/antifungal 102 189 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1385 Lele-ChrLele26 9725472 9735523 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1385 6 592 Receptor kinase-like Gene Family AT1G70520 37.377 1.57e-120 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele26g1385 Pkinase 1.3e-50 CL0016