Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1383 ATGAAGGATGCTTCCTTAGGTACGAGAGCAGTGGATTCTTTGACCAGAACACAGATGCTGGCAACAACATTATACTCCACCTCTGCTTTCTTTGCTGATAATCAAACCACTAATATCAAGCATTTCTTGAAACAAGGAGGAGGTTCAACCAAGAAGAAAGCTATTATTGGTGGGGTTGTTGGAGGTGCATCTGTTATTTTGATTCTTCTTGCATTATTTGCTTTGCATAGACGATCACAGTTATCCATGAGGAATATTAGAGGTGACATTTTGGGAGCAACTGAGTTGCAAGGCCCTGTTAACTATAGGTATAAAGATCTGAAATCTGCAACAAAAAATTTCAGCAAAGAGCATAAACTAGGAGAAGGAGGTTTTGGTGATGTATACAAGGGCACTTTGAAAAATGGAAAAGTTGTTGCTGTCAAGAAATTGGCTTTAGGCCAATCCAAAGAGATGGAGAAAAACTTTGAAAGTGAAGTGAAGCTTATAAGTAATGTTCATCATCGGAATCTTGTTCGGCTTCTGGGATGTTGTAGCAAAGGACAAGAAAGAATCCTTGTTTATGAGTACATGAAAAACAACAATGTTGGCCAATACTTATTCGGTAAAAATAAAGGTTCTCTCAGTTGGAAGCTACGTCACGGTATAATTTTGGGTATTGCAAGGGGTTTGGCCTATCTACATGAGGAGTTCCATGTTTGTATCATACACAGAGATATAAAAACTAGCAACATCCTCTTGGACGATGATTTTCAACCTAAAATTGCCGATTTTGGACTAGCAAGGCTTTTGCCAAGAGACCAATCTCATCTTAATACAAGATTTGCTGGAACAATGGGATATACAGCACCTGAATATGCAATGCATGGAACACTATCAGAGAAGGTTGATACTTACAGCTATGGAGTTGTAGTCCTAGAAATTATAAGCGGACAAAAGAGTGGTGAAGTGAAGGTTGATAATGAAAGCGAATTACTCCTTCAAAAGGCTTGGAAGCTATACGAGAGAGGAATGCACTTAGAGTTTGTGGACAAAACCTTAGACACAAGTGAGTATGATGCAGAAGAAGTAAAGAAAATCATAGAGATTGGATTACTTTGCACGCAAGCATCTCCTGCTGCGAGGCCAACAATGTCTGAAATTGTTGTTATGCTCAAAAGCAAAGGATTAATGGAGAACAAGAAACCCACTATGCCTGTCTACGTTGATCCTAATTGGAGGCCCAAAAGAGACACTTCTACGTCTAATAGTTCATCTTCATCAAATGCAACTGTCTCTCGGTCCATTCTATCAGGAAGGTGA 1302 0.3925 MKDASLGTRAVDSLTRTQMLATTLYSTSAFFADNQTTNIKHFLKQGGGSTKKKAIIGGVVGGASVILILLALFALHRRSQLSMRNIRGDILGATELQGPVNYRYKDLKSATKNFSKEHKLGEGGFGDVYKGTLKNGKVVAVKKLALGQSKEMEKNFESEVKLISNVHHRNLVRLLGCCSKGQERILVYEYMKNNNVGQYLFGKNKGSLSWKLRHGIILGIARGLAYLHEEFHVCIIHRDIKTSNILLDDDFQPKIADFGLARLLPRDQSHLNTRFAGTMGYTAPEYAMHGTLSEKVDTYSYGVVVLEIISGQKSGEVKVDNESELLLQKAWKLYERGMHLEFVDKTLDTSEYDAEEVKKIIEIGLLCTQASPAARPTMSEIVVMLKSKGLMENKKPTMPVYVDPNWRPKRDTSTSNSSSSSNATVSRSILSGR 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1383 433 ProSitePatterns Protein kinases ATP-binding region signature. 120 143 IPR017441 GO:0005524
Lele26g1383 433 SUPERFAMILY Protein kinase-like (PK-like) 98 420 IPR011009 -
Lele26g1383 433 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 35 419 - -
Lele26g1383 433 ProSiteProfiles Protein kinase domain profile. 114 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1383 433 Pfam Protein kinase domain 114 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1383 433 Gene3D Phosphorylase Kinase; domain 1 81 190 - -
Lele26g1383 433 SMART serkin_6 114 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1383 433 FunFam Cysteine-rich receptor-like protein kinase 2 79 190 - -
Lele26g1383 433 MobiDBLite consensus disorder prediction 396 433 - -
Lele26g1383 433 CDD STKc_IRAK 120 386 - -
Lele26g1383 433 FunFam Cysteine-rich receptor-like protein kinase 2 191 393 - -
Lele26g1383 433 MobiDBLite consensus disorder prediction 408 433 - -
Lele26g1383 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Lele26g1383 433 Gene3D Transferase(Phosphotransferase) domain 1 191 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1383 Lele-ChrLele26 9680495 9685021 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1383 99 421 Receptor kinase-like Gene Family AT1G56120 48.607 1.97e-98 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele26g1383 Pkinase 9.8e-52 CL0016