Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1382 ATGAAAACTAGCATAGCCAAATTTACAAAGTGCTTAGACGTCGCTGCCGCACAAATCCGCCACTGCTCCACCGGGTCCTACGGCGGCCATGTCGTCTACGATGGCTGCTTCCTCAGGTACGAGGCTGGTTCATCGAGCAATAAGGCGATAATTATTGGCGGAGTTGTAGGAGTTCTAGCACTTGTTTCGATCCTTCTTGCATTATTAGTTTGGATTAGACGACCAAAAAGCCCCAAGAGAGTTCCTAGAGGAGATATAACTGAAACAAGTAAGTTGGAAGGCCCAATGACTTATAGTTATCAGGATTTGAAATCTGCTACCAAAAATTTCAGTGATGAAAATAAACTAGGAGAAGGAGGATTTGGAACTTTAGGTTATACATCACCCGAATATACAATTCATGGTCAATTATCAGAGAAAGTCGATATATACAACTATGGTGTTGTAGTCTTGGAAATTATTAGTGGTAGAAAATATGAAGAATTAAGGGTTGATGGTGATGCTGAAGGCGAATTCCTCCTTCAAAAGGCATGGAAACTGTACGAGAGACACATGCATTTAGAGTTAGTGGACAATACCTTAGACTCTAATGAGTATGATGCAGAAGAAGTGAAGAAAATCATAGAAATCGGTTTGCTTTGCACTCAAGCATCTCCTGCTATAAGGCCAGCAATGTCTGAAGTTGTTGTTTTGATGCAAAACAAGCACTTATTAGAGAACCTAAGACCAACTATGCCTATCTTGGTTGAAACTAATTAA 759 0.4032 MKTSIAKFTKCLDVAAAQIRHCSTGSYGGHVVYDGCFLRYEAGSSSNKAIIIGGVVGVLALVSILLALLVWIRRPKSPKRVPRGDITETSKLEGPMTYSYQDLKSATKNFSDENKLGEGGFGTLGYTSPEYTIHGQLSEKVDIYNYGVVVLEIISGRKYEELRVDGDAEGEFLLQKAWKLYERHMHLELVDNTLDSNEYDAEEVKKIIEIGLLCTQASPAIRPAMSEVVVLMQNKHLLENLRPTMPILVETN 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1382 252 Gene3D - 3 44 IPR038408 -
Lele26g1382 252 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 6 123 - -
Lele26g1382 252 CDD TM_EGFR-like 50 80 - -
Lele26g1382 252 SUPERFAMILY Protein kinase-like (PK-like) 122 238 IPR011009 -
Lele26g1382 252 Pfam Protein tyrosine and serine/threonine kinase 115 229 IPR001245 GO:0004672|GO:0006468
Lele26g1382 252 Gene3D Transferase(Phosphotransferase) domain 1 97 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1382 Lele-ChrLele26 9588339 9592420 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1382 122 233 Receptor kinase-like Gene Family AT1G56120 48.673 9.84e-29 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele26g1382 PK_Tyr_Ser-Thr 3.6e-06 CL0016