Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1381 ATGTCTCAGTATACCATAACTCATTTGAAAATACGACCAAAAACCCCTAAGAAAGTTCCCAGAGGAGAGATAACTGGAGAAAGCAAGTTAGCCGGCCCAGTTACTTACAGTTATAAGGAATTGAAGTTTGCAACCAAGAATTTTAGTAAAGAAAATAAACTAGGAGAAGGAGGGTTTGGTGTTGTATATAAGGGTACTCTAAAAAATGGAACAATAGGATACACGGCACCTGAGTATATTCTTCATGGCCAATTATCAGAGAAGGCCGATATCTATAGTTATGGTGTTGTAGTATTGGAAATCATCAGTGGTCAACACAGTAAGGAATTAACCATTGATGGAGATGCTGAGGGTGAATTCCTCCTTCAAAAGGCTTGGAAATTATATGACAAAGGCATGCACCTAGAGTTGGTGGACAAGACCTTAGATCCTACGGACTATGATGAAGAAGAAGTGAAGAAAATCATAGAGATCGGTTTGCTTTGCACTCAAGCATCTGCTGATACAAGGCCAATGATGTCTGAAGTGGTATTTTTGCTCCAAAACAAGGATTTGTTAGAGAATATGAAACCCACTATGCCTATCTTGATTGAAACTAATTAA 603 0.3831 MSQYTITHLKIRPKTPKKVPRGEITGESKLAGPVTYSYKELKFATKNFSKENKLGEGGFGVVYKGTLKNGTIGYTAPEYILHGQLSEKADIYSYGVVVLEIISGQHSKELTIDGDAEGEFLLQKAWKLYDKGMHLELVDKTLDPTDYDEEEVKKIIEIGLLCTQASADTRPMMSEVVFLLQNKDLLENMKPTMPILIETN 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1381 200 SUPERFAMILY Protein kinase-like (PK-like) 70 184 IPR011009 -
Lele26g1381 200 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 35 71 - -
Lele26g1381 200 Gene3D Phosphorylase Kinase; domain 1 21 71 - -
Lele26g1381 200 Gene3D Transferase(Phosphotransferase) domain 1 72 194 - -
Lele26g1381 200 Pfam Protein tyrosine and serine/threonine kinase 71 177 IPR001245 GO:0004672|GO:0006468
Lele26g1381 200 SUPERFAMILY Protein kinase-like (PK-like) 29 68 IPR011009 -
Lele26g1381 200 ProSiteProfiles Protein kinase domain profile. 1 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1381 Lele-ChrLele26 9581769 9583965 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1381 33 70 Receptor kinase-like Gene Family AT1G56120 63.158 8.19e-10 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele26g1381 PK_Tyr_Ser-Thr 1.5e-08 CL0016