LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele26g1379	ATGTTTTGTGTCTTTGCAGGTTCAAATAAGAAGGGGGCCATTGTAGGTGTAGTTGTTGGGGGTGTAGCTTTTGTTTTGATCCTTCTTACAGTACTATTAGCTTGGATTAAACGACCAAAAAGGCCTCAGAGATCAGTTCCTAGAGGTGACATATCTGGAGTAAGTAAGTTGAGAGGCCCAATTACTTACAGTTATAGGGAGTTGAAGTTTGCTACTAAAAGTTTCAGGGCAGAAAATAAACTTGGAGAAGGAGGATTTGGTGCTGTATATAAGGGTACTTTGAAGAATGGAAAAGTAGTCGCTGTAAAGAAATTAACACTACGTAGTGAGTCTAAAAAGGTGGAAGAAGAATTTGAAAGTGAAGTGAAGCTCATAAGCAATGTTCATCATCGAAATCTTATTCGGCTTCTTGGATATTGCAGCAAAGGCGATGAGAGAATTCTTATTTATGAATATATGAAAAACACCAGTCTTGACAAATTCTTATTTGGAAAACATAGAGGTTCTCTCAACTGGAAGCAACGATATGATATAATTTTAGGAACAGCAAAGGGTTTGGCTTATCTACATGAAGAATTTTACGTTCGTATCATACATAGAGATATAAAGACCAACAACATCCTCTTAGATGATGATCTCCAACCAAAAATTGCTGATTTTGGTTTAGCAAGACTGATGCCCGAAGAAAAAACTCATCTTAACACAAAATTTGCTGGAACATTAGGATACACAGCACCAGAATATGCAATTCATGGTCAATTATCAGAAAAAGCTGATATTTATAGCTACGGGGTTGTGGTCTTAGAAATTATTAGTGGTGAACAAAGCAATACATTGAAGATGCATGGTGATTCTGAAGGCGCATTCCTCCTTCAAACGGCTTGGAAACTATATGAGAGAGGCATACATATAGAATTGGTGGACGATACCTTGGATCCTAATGATTATAATGTAGAAGAAGTGAAGAAAATCATAGAGATTGGTTTGCTTTGCACCCAAGCATCTGCTGAATTAAGGCCAACAATGTCTGAAGTAATTGTTTTGCTCCAAGGCGAGAGCTTATTAGAGAATATGAGACCCACCATGCCTATCTTGATTGAAACTTAA	1107	0.3722	MFCVFAGSNKKGAIVGVVVGGVAFVLILLTVLLAWIKRPKRPQRSVPRGDISGVSKLRGPITYSYRELKFATKSFRAENKLGEGGFGAVYKGTLKNGKVVAVKKLTLRSESKKVEEEFESEVKLISNVHHRNLIRLLGYCSKGDERILIYEYMKNTSLDKFLFGKHRGSLNWKQRYDIILGTAKGLAYLHEEFYVRIIHRDIKTNNILLDDDLQPKIADFGLARLMPEEKTHLNTKFAGTLGYTAPEYAIHGQLSEKADIYSYGVVVLEIISGEQSNTLKMHGDSEGAFLLQTAWKLYERGIHIELVDDTLDPNDYNVEEVKKIIEIGLLCTQASAELRPTMSEVIVLLQGESLLENMRPTMPILIET	368

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele26g1379	368	CDD	STKc_IRAK	81	351	-	-
	Lele26g1379	368	ProSiteProfiles	Protein kinase domain profile.	75	355	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele26g1379	368	FunFam	Cysteine-rich receptor-like protein kinase 2	153	357	-	-
	Lele26g1379	368	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	197	209	IPR008271	GO:0004672\|GO:0006468
	Lele26g1379	368	SMART	serkin_6	75	349	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele26g1379	368	SUPERFAMILY	Protein kinase-like (PK-like)	56	349	IPR011009	-
	Lele26g1379	368	Gene3D	Transferase(Phosphotransferase) domain 1	153	359	-	-
	Lele26g1379	368	FunFam	Cysteine-rich receptor-like protein kinase 2	42	152	-	-
	Lele26g1379	368	ProSitePatterns	Protein kinases ATP-binding region signature.	81	104	IPR017441	GO:0005524
	Lele26g1379	368	Pfam	Protein kinase domain	76	278	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele26g1379	368	Gene3D	Phosphorylase Kinase; domain 1	47	152	-	-
	Lele26g1379	368	PANTHER	CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3	23	366	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele26g1379	Lele-ChrLele26	9516300	9518321	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele26g1379	7	353	Receptor kinase-like Gene Family	AT1G56120	49.425	1.88e-107	333

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Lele26g1379		Pkinase	5.1e-52	CL0016