Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1378 ATGGCCAGTTCTTCAAGCAACAAAGGGGCAACTATTGGTGGAGTTCTTGGAGGTGTAGCTCTTGCTTTGATCCTCCTTGCATTATTTGCCTGGATTAAACGACGAAGAAGCGATGAGACGTTTTCTAGAGGAAACCAGTTGAGAAACGACTTAACTGGAGTAAGCAAGTTGAAAGGCCCACTTACTTACAGTTATAACGAATTGATGAGTGCAACAAAAAGTTTTAGTGAGGAAAATAAACTAGGAGAAGGGGGATTTGGGGCTGTATACAAGGGCACTTTGAAGAATGGGAAAGTTGTTGCAGTCAAGAAATTGACTACATTCCGCTCCAAAAGGGTGGAGGAAGATTTTGAAAGTGAAGTGATGCTTATAAGTAATGTTCATCATCGGAATCTTGTTCGACTTCTGGGATGTTGTAGTAAAGGCCATGATAGAATCCTTGTCTATGAATACATGAAAAACAGCAGTCTTGATAGATTCTTATTCGGTAAGAAGAAAGGGGCATTCCTTCTTCAAAAAGCTTGGAACCTATATGAGAAAGGAAAGCATATAGAGTTGGTGGACAAAACTGTTGACCCGAAAGGTTATGATGCAGAAGAAGTGAAGAAAACTATAGAGATTGGTTTGCTTTGCACGCAGGCATCTGCAGATACAAGGCCAATGATGTCTGAAGTAGTTGCTATGCTTCAAAACAAGGATCTATTAGAGAACATAAGGCCCACTATGCCTATCTTGATAGGAACTGATGATTAG 753 0.4037 MASSSSNKGATIGGVLGGVALALILLALFAWIKRRRSDETFSRGNQLRNDLTGVSKLKGPLTYSYNELMSATKSFSEENKLGEGGFGAVYKGTLKNGKVVAVKKLTTFRSKRVEEDFESEVMLISNVHHRNLVRLLGCCSKGHDRILVYEYMKNSSLDRFLFGKKKGAFLLQKAWNLYEKGKHIELVDKTVDPKGYDAEEVKKTIEIGLLCTQASADTRPMMSEVVAMLQNKDLLENIRPTMPILIGTDD 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1378 250 FunFam Cysteine-rich receptor-like protein kinase 2 37 151 - -
Lele26g1378 250 Pfam Protein tyrosine and serine/threonine kinase 78 172 IPR001245 GO:0004672|GO:0006468
Lele26g1378 250 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 167 234 - -
Lele26g1378 250 Gene3D Single helix bin 1 37 - -
Lele26g1378 250 ProSitePatterns Protein kinases ATP-binding region signature. 81 104 IPR017441 GO:0005524
Lele26g1378 250 ProSiteProfiles Protein kinase domain profile. 75 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1378 250 Gene3D Phosphorylase Kinase; domain 1 38 148 - -
Lele26g1378 250 Gene3D Transferase(Phosphotransferase) domain 1 149 244 - -
Lele26g1378 250 SUPERFAMILY Protein kinase-like (PK-like) 53 167 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1378 Lele-ChrLele26 9462884 9464913 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1378 163 230 Receptor kinase-like Gene Family AT1G56120 52.941 1.48e-13 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele26g1378 PK_Tyr_Ser-Thr 3.4e-19 CL0016