Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1376 ATGCTTCAACCTGCTCATCTTCTTCATCCCTTCTTCTTACTATTCTGGTTATGCTGGACTCTTAACGTAGTCGTTTCAAACCCACAGACGAATCTTCTGAACACTGCGTGCAACCCATACTACGAATTCGTCATCTCCAACTTCACCATCTTCAGTGCGAACCTAAACGCAACGTTTCGAGACCTCAGAACACAGGTCAAAGACCAAAACAAGCACTTTGCGACGTCGCAGCTAAGTGACCAGAACAACCCTGCTTCCTCTCTTTTTCAATGCAGAGACTACCTCTCCATCTCTGACTGTCTCGCCTGCTTTGATGTCGCCGCCGTTGATATACGCAATTGCTCTGCTGGCACCCATGGTGCTCGCGTAGTCTACGACGGCTGCTTTCTCAGGTACGAGATGAGCACTTTCTTCGGCGAGACAACATCATTCAATGCTGTAGCGTGTGGGAATAGTAGTAGTGAAGGAGAAGCCACAGAATTTATCTCAGCTGCCCAAAAACTGCTAATGAATCTGCGAACAACAACACCAACCGTGTCCGGCTTTTATGAAGCTATGGAGACCCAAGTGCCTAACAATGGTCCAACTATTTTTGCATATGCTCAATGTATTCAAACAATTACACAAAGTGCTTGCCTTGATTGCTTAAACACTGGCTACGGCAATATGCAGACTTGTCTTCCCAATCCAGATGGCACGGCTTATGCTGCTGGATGCTTCATCAGATACTCCACCTCTTCCTTCTTCCCTGATAACCAAACCATTCACACCATACCTTTGGTCAAACAAGGTAGTAGCACTAATAAGGGGGCTATTATTGGTGGTGTAGTTGGAGCTGTCGCTGTTGTTGTTTTGGTCCTCCTTGGATTATTTGTTTGGATAAAACGACAACGTCGACCAAAAAAGCCAGAGAGTGCTCCTAGAGATGACATACCTGGAGCAAGCAAGTTCAAAGCAGCAGAAACTTACGAATATAGGGAATTGAAGCTGGCAACAAAAAATTTTAGTGTAGAAAATAAGCTAGGAGAAGGAGGATTTGGTGCTGTATACAAGGGTACTTTGAAGGGTGGGAAAGAAGTGGCCATCAAGAAATTAACTTTACGCAACTCCAAGAGAATGGAGAGAATTGAGGAAGAATTTGAGAGTGAAATAAGGTTGATAAGTAATGTTCATCATCGAAATCTAACTCGACTTCTGGGATGTTGTAGTAAAGGCGATGAGAGAATCCTTGTTTTTGAATACATGAAACACACCAGCCTTGATAGGTTTTTATTTGGTAAAAGTGGAGGTTTGCTCAATTGGAAGCAGAGATATGATATTATTTTAGGAACAGCAAGAGGTTTATCTTATTTACATGAGGGATTTCATATTCGTATAATACATAGAGATATAAAGACCAGCAATATTCTCTTGGATGATGATTTTCAACCTAAAATTGCTGATTTTGGGTTGGCAAGACTTTTGCCGGAGGATAAAACTCATGTCAGTACAAAATTTGCCGGAACATTGGGATATACAGCACCAGAATATGCAATTCATGGTAAATTATCAGAAAAGGCTGATGTTTTCAGCTATGGTGTTGTAGTCTTAGAAATCATTAGTGGTAAAAGGAGTAAAGAACTCAAGGTCGATGCCGATGGTGAAGGCGAATTCCTCCTTCAAAATGCTTGGAAACTATATGAGAGTGGCATGCAATTAGAGTTGGTGGATAATACCTTAGACCCTAATGAGTATGATGCAGAAGAAGTGAAGAAAATCATAGAGATTGGTTTGCTTTGCACTCAAGCATCTGCTGACATGAGACCAACAATGTCTGAAGTTGTTGTTTTGCTCCAAAACGAGGACTTATCAGAGACAATAAAACCCACCATGCCTCTCTTGATTGAAGCTAATTAG 1896 0.4182 MLQPAHLLHPFFLLFWLCWTLNVVVSNPQTNLLNTACNPYYEFVISNFTIFSANLNATFRDLRTQVKDQNKHFATSQLSDQNNPASSLFQCRDYLSISDCLACFDVAAVDIRNCSAGTHGARVVYDGCFLRYEMSTFFGETTSFNAVACGNSSSEGEATEFISAAQKLLMNLRTTTPTVSGFYEAMETQVPNNGPTIFAYAQCIQTITQSACLDCLNTGYGNMQTCLPNPDGTAYAAGCFIRYSTSSFFPDNQTIHTIPLVKQGSSTNKGAIIGGVVGAVAVVVLVLLGLFVWIKRQRRPKKPESAPRDDIPGASKFKAAETYEYRELKLATKNFSVENKLGEGGFGAVYKGTLKGGKEVAIKKLTLRNSKRMERIEEEFESEIRLISNVHHRNLTRLLGCCSKGDERILVFEYMKHTSLDRFLFGKSGGLLNWKQRYDIILGTARGLSYLHEGFHIRIIHRDIKTSNILLDDDFQPKIADFGLARLLPEDKTHVSTKFAGTLGYTAPEYAIHGKLSEKADVFSYGVVVLEIISGKRSKELKVDADGEGEFLLQNAWKLYESGMQLELVDNTLDPNEYDAEEVKKIIEIGLLCTQASADMRPTMSEVVVLLQNEDLSETIKPTMPLLIEAN 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1376 631 ProSitePatterns Protein kinases ATP-binding region signature. 341 364 IPR017441 GO:0005524
Lele26g1376 631 Gene3D Phosphorylase Kinase; domain 1 309 414 - -
Lele26g1376 631 CDD STKc_IRAK 341 613 - -
Lele26g1376 631 Gene3D - 30 137 IPR038408 -
Lele26g1376 631 Gene3D - 142 248 IPR038408 -
Lele26g1376 631 Pfam Salt stress response/antifungal 49 133 IPR002902 -
Lele26g1376 631 Pfam Salt stress response/antifungal 149 245 IPR002902 -
Lele26g1376 631 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 89 628 - -
Lele26g1376 631 FunFam Cysteine-rich receptor-like protein kinase 2 301 414 - -
Lele26g1376 631 ProSiteProfiles Gnk2-homologous domain profile. 30 137 IPR002902 -
Lele26g1376 631 ProSiteProfiles Gnk2-homologous domain profile. 143 248 IPR002902 -
Lele26g1376 631 SUPERFAMILY Protein kinase-like (PK-like) 319 611 IPR011009 -
Lele26g1376 631 ProSiteProfiles Protein kinase domain profile. 335 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1376 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Lele26g1376 631 Pfam Protein tyrosine and serine/threonine kinase 337 609 IPR001245 GO:0004672|GO:0006468
Lele26g1376 631 Gene3D Transferase(Phosphotransferase) domain 1 415 622 - -
Lele26g1376 631 SMART serkin_6 335 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1376 631 FunFam Cysteine-rich receptor-like protein kinase 2 415 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1376 Lele-ChrLele26 9414433 9418907 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1376 3 629 Receptor kinase-like Gene Family AT1G70520 36.150 4.17e-123 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele26g1376 PK_Tyr_Ser-Thr 4.8e-49 CL0016