Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1374 ATGTTTATGTTGCAACCTGTTACTCTCTTTCTTCCCCTGTTCACTACCTTCATGTCCTCGAACGGCGTCGTTTCCGACCCCCAGACCTATCTTCTCAACCCTGGCTGCTTCCAGTACGATAGAATAGATCCAATAGATGCTAATTCCTTCAATCAAAGCCTAAACGCAGCGTTTGCAGATCTCGCCAACCAGAGCAATCACTTCGCCACGGCGCAGCAAGCCACCGGAGCCACCCCCGTGTTCGCTCTTTTTCAGTGCAGAAGCTACCTCTCTGCCGCCGACTGTGCCGCCTGCTTCACCGTCGCTGCCGCTCAAATCCGCAACTGCTCCGCCGGAACCAACGCCGCCCGTGTCATCTACGACGGCTGCTTCCTCAGGTATGAGAGCAGCAATTTCTTGGAGCAAGCAACAGGCTCTTTCAATTCTGCATCATGTGGAAATCAGACAACAGAAGTAACCACAACAACAACATTTAACTCAAGTATTCAACAAGTGCTAATGAATCTGCAAACAGCAACACCCAGAATCACTGGTTTCTCTGCAGCCACAAAGACGCAAGTGCCTGATAATAATAATAACAACAACAACACAACCATTTATGCGTATGCACAATGTACTGAAACTATCTCACAGAGTGGCTGCGAGGATTGCTTGAAGCAAGGCGTCAACACTATGCAGACTTGTCTTCCCAGTTCAGATGGTAGGGCTTTTGATGCTGGCTGTTTCATGAGATACTCCACCTCTTCCTTCTTTCCTCATAATTACAACACCATTGATATCACTACTCCCTCAGGCAAACAAGGTTCAAGTAACAAAAACGGGGCCATTATTGGTGGAGTTGTTGGAGGTGTGGCTTTTGTTTTGTTTCTCCTTTCATTATTTGCCTGGTGGATGTATTTTAGACGGTCAGAAAGGTCTGAAAGGGTTCCTAGAGGTGAGATAATGGGAGAATCCAAGTTGAAAGGCCCACTTAATTACAATTATAACGAACTGAAATCTGCCACCAAGAATTTCAGTGAAAAGAATAAATTAGGAGAAGGAGGATTTGGTGCTGTATACAAGGGAACTTTGAAAAATGGAAAAATAGTTGCAGTCAAGAAACTTGTTATGCGACAATCCAACAGGATGGATGAAGAATTTGCGAGTGAAGTGAGGCTAATAAATAATATTCATCATCGAAGTCTTGTTCGGCTTCTAGGATGCTCCAGTAAAGGCAACGAGAGAATTCTTGTTTATGAATACATGAAAAACACCAGTCTTGACAGATTCTTATTCGGTAGCAACAAAGGTTCTCTCCGTTGGAAGCAACGATATGATATAATCTTAGGCATAGCAAGGGGTTTGACCTATCTGCATGAGGAATTTCACATTTGTATCATACATAGAGATATCAAGACTAACAACATTCTTCTTGATGATGATTTTCAACCTAAGATTGCTGATTTTGGGTTGGCAAGACTTTTACCTGAGAATCAGACTCATCTCAGCACTAGATTTGCAGGAACATTGGGATACACAGCACCTGAATATGCAATTCATGGCCAGTTATCAGAAAAAGCTGATACTTACAGCTATGGTATTATAGTCTTAGAAATCATCAGTGGCCAGAGGAACAGTGAACTAAAGGTTGATGCCCATGCTGATGGAGAATTCCTCCTTCAACAAGCTTGGAAACTATATGAGAGAGGCATGCACTTAGAGTTGGTGGACAATACCTTAGACCCTAATGACTATGATGCAGAAGAGGTGAAGAAAATCATAGAGATTGGTCTGCTTTGCACACAAGCATCACCTGCAATAAGGCCAACAATGTCTGAAGTAGTTGTTTTGCTGCAAAGTAATAAAGACTTATCAAAGAATATGAGACCCACCATGCCTCTCTTTGTTGAAACAGATTCTACTTATACTGCTTCCTCAACATCCAATGCTACTATCTCTACTTCCGTGATATCGGCAAGATCATGA 1965 0.4295 MFMLQPVTLFLPLFTTFMSSNGVVSDPQTYLLNPGCFQYDRIDPIDANSFNQSLNAAFADLANQSNHFATAQQATGATPVFALFQCRSYLSAADCAACFTVAAAQIRNCSAGTNAARVIYDGCFLRYESSNFLEQATGSFNSASCGNQTTEVTTTTTFNSSIQQVLMNLQTATPRITGFSAATKTQVPDNNNNNNNTTIYAYAQCTETISQSGCEDCLKQGVNTMQTCLPSSDGRAFDAGCFMRYSTSSFFPHNYNTIDITTPSGKQGSSNKNGAIIGGVVGGVAFVLFLLSLFAWWMYFRRSERSERVPRGEIMGESKLKGPLNYNYNELKSATKNFSEKNKLGEGGFGAVYKGTLKNGKIVAVKKLVMRQSNRMDEEFASEVRLINNIHHRSLVRLLGCSSKGNERILVYEYMKNTSLDRFLFGSNKGSLRWKQRYDIILGIARGLTYLHEEFHICIIHRDIKTNNILLDDDFQPKIADFGLARLLPENQTHLSTRFAGTLGYTAPEYAIHGQLSEKADTYSYGIIVLEIISGQRNSELKVDAHADGEFLLQQAWKLYERGMHLELVDNTLDPNDYDAEEVKKIIEIGLLCTQASPAIRPTMSEVVVLLQSNKDLSKNMRPTMPLFVETDSTYTASSTSNATISTSVISARS 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1374 654 ProSitePatterns Protein kinases ATP-binding region signature. 344 367 IPR017441 GO:0005524
Lele26g1374 654 Gene3D - 39 132 IPR038408 -
Lele26g1374 654 Gene3D - 138 250 IPR038408 -
Lele26g1374 654 Gene3D Phosphorylase Kinase; domain 1 312 414 - -
Lele26g1374 654 SMART serkin_6 338 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1374 654 ProSiteProfiles Gnk2-homologous domain profile. 32 132 IPR002902 -
Lele26g1374 654 SUPERFAMILY Protein kinase-like (PK-like) 322 637 IPR011009 -
Lele26g1374 654 CDD STKc_IRAK 344 612 - -
Lele26g1374 654 FunFam Cysteine-rich receptor-like protein kinase 2 415 619 - -
Lele26g1374 654 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 82 640 - -
Lele26g1374 654 Pfam Salt stress response/antifungal 47 129 IPR002902 -
Lele26g1374 654 Pfam Salt stress response/antifungal 145 247 IPR002902 -
Lele26g1374 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Lele26g1374 654 ProSiteProfiles Gnk2-homologous domain profile. 140 250 IPR002902 -
Lele26g1374 654 FunFam Cysteine-rich receptor-like protein kinase 2 302 414 - -
Lele26g1374 654 Gene3D Transferase(Phosphotransferase) domain 1 415 629 - -
Lele26g1374 654 Pfam Protein kinase domain 338 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1374 654 FunFam Cysteine-rich receptor-like protein kinase 2 140 250 - -
Lele26g1374 654 ProSiteProfiles Protein kinase domain profile. 338 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1374 Lele-ChrLele26 9378541 9383315 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1374 64 630 Receptor kinase-like Gene Family AT1G70520 37.608 3.58e-127 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele26g1374 Pkinase 1.7e-49 CL0016