Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1370 ATGGAATGTGGGGATGGAGCTTCAGGAGATAAAACATTTGAGTCAACAGCTCAACAAGTGCTAATCAATCTCCAAACAGCAACACCAAGAATTGCTGGTTTCTTTGCCCCCACAAAGACTCAAGTACCTAACAATTGTACTACTACTGTTTATGCCATTGCTCAATGTGCTGATACTGTCACAGACACTGGCTGCCATGATTGCTTGAAGGTTGGCTACAAGAATGTGCAGAATTGTCTTCCCAATTTGGAAGGTAGGTCTTACGATGCTGGCTGCTTCATGAGATACTCCACCACTTCCTTCTTTCCTGATAACCAGACCATTGATCTCACACCATTCTTGAAACAAGGTTCAAGCAAGAGGGGAGCTATTATTGGTGGGGTTGTAGGTGGTGTAGCTTTTGTTTTGATTGTCCTTGCAGTGTTTCTTTTGATTATACAATCCACGAGGCCAAAGAAGCTTCCTAGGGTAACAGGGGACATATTGGGAGCAACAGAGTTGAAAGGCCCAGTTAATTACAGGTATAAGGATTTGAAGATTGCCACAAAAAATTTTAGTGAAGAAAATAAACTGGGAGAAGGAGGATTTGGTGATGTATACAAGGGCACTCTTAAGAATGGCAAAATAGTTGCAGTCAAGAAATTAGCTTTACGCAACACCAAGAGGATAGAGGAAGATTTTGAAAGTGAAGTGAAACTTATAAGTAATGTTCATCATCGGAATCTTGTTCGGCTTTTGGGATGTTGCAGTAAAGGCCAAGAGAAGATCCTTGTATATGAATACATGAAAAACAACAGTCTTGACAGATTCTTATTTGGTGAAAACAAAGGTTCTCTCAGCTGGAAGCAACGATATGAAATAATTTTAGGCACGGCAAGAGGTTTGGCCTATTTACATGAGGAATTCTATGTTTGTATCATACATAGAGATATAAAGACCAACAACATCCTATTAGATGATGATCTTCAACCTAGAATTTCTGATTTTGGGTTGGCAAGACTTCTACCAAGGGACCAATCTCACCTTAGCACAAAGTTTGCAGGAACATTGGGATACACAGCCCCTGAGTATGCAATTCATGGCCAATTATCAGAGAAGGCCGATACCTATAGTTATGGAGTTGTAGTCCTAGAAATCATCAGCGGCCAAAAAAGCTGTAAATTAATGGTTGATCCTGAAGATGAAGGCGAATTCCTCCTTCAACAAGCCTGGAAACTATATGAGAAAGACATGCACTTAAAGTTGGTGGACGATACCTTAGACCCTAATGACTATAATCCAGAAGAAATGAAGAAAATAATAGAGATCGGTTTGCTTTGTACCCAAGCATCTCCTGCGATAAGGCCAACAATGTCTGAAGTTGTTCTTATGCTTAGAAGCAAGGGCTTGTTGGGGCAACTGAAACCCACTATGCCTGTCTTTATCGAAACTAATTTGAGGTCTAGGGAAGGTACCTTTACCTCATCTGCTTTCCTTAAATCCAATGCTACAGCCTCCACTATTACACTATCAGGAAGATGA 1521 0.4057 MECGDGASGDKTFESTAQQVLINLQTATPRIAGFFAPTKTQVPNNCTTTVYAIAQCADTVTDTGCHDCLKVGYKNVQNCLPNLEGRSYDAGCFMRYSTTSFFPDNQTIDLTPFLKQGSSKRGAIIGGVVGGVAFVLIVLAVFLLIIQSTRPKKLPRVTGDILGATELKGPVNYRYKDLKIATKNFSEENKLGEGGFGDVYKGTLKNGKIVAVKKLALRNTKRIEEDFESEVKLISNVHHRNLVRLLGCCSKGQEKILVYEYMKNNSLDRFLFGENKGSLSWKQRYEIILGTARGLAYLHEEFYVCIIHRDIKTNNILLDDDLQPRISDFGLARLLPRDQSHLSTKFAGTLGYTAPEYAIHGQLSEKADTYSYGVVVLEIISGQKSCKLMVDPEDEGEFLLQQAWKLYEKDMHLKLVDDTLDPNDYNPEEMKKIIEIGLLCTQASPAIRPTMSEVVLMLRSKGLLGQLKPTMPVFIETNLRSREGTFTSSAFLKSNATASTITLSGR 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1370 506 CDD STKc_IRAK 191 458 - -
Lele26g1370 506 FunFam Cysteine-rich receptor-like protein kinase 2 1 101 - -
Lele26g1370 506 ProSiteProfiles Gnk2-homologous domain profile. 1 101 IPR002902 -
Lele26g1370 506 ProSitePatterns Protein kinases ATP-binding region signature. 191 214 IPR017441 GO:0005524
Lele26g1370 506 SMART serkin_6 185 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1370 506 Gene3D Phosphorylase Kinase; domain 1 162 261 - -
Lele26g1370 506 FunFam Cysteine-rich receptor-like protein kinase 2 262 466 - -
Lele26g1370 506 Pfam Salt stress response/antifungal 8 98 IPR002902 -
Lele26g1370 506 ProSitePatterns Serine/Threonine protein kinases active-site signature. 306 318 IPR008271 GO:0004672|GO:0006468
Lele26g1370 506 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 39 489 - -
Lele26g1370 506 ProSiteProfiles Protein kinase domain profile. 185 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1370 506 Gene3D Transferase(Phosphotransferase) domain 1 262 463 - -
Lele26g1370 506 Gene3D - 5 101 IPR038408 -
Lele26g1370 506 Pfam Protein kinase domain 186 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1370 506 SUPERFAMILY Protein kinase-like (PK-like) 167 458 IPR011009 -
Lele26g1370 506 FunFam Cysteine-rich receptor-like protein kinase 2 151 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1370 Lele-ChrLele26 9352603 9355480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1370 3 506 Receptor kinase-like Gene Family AT1G70520 40.777 3.62e-114 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele26g1370 Pkinase 1.6e-51 CL0016